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NC_047948.1__YP_009800006.1__HOT02_gp166__00165

Bact-Vir

NC_047948.1__YP_009800006.1__HOT02_gp166__00165

Identity

Accession:
NC_047948 ↗
Kingdom:
phage

Quality

94.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-55
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2avwD01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.71 60.0 4.51e-01 100.0% 59.6%
1rvjH02 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.69 58.0 4.40e-01 98.1% 43.9%
4z24A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 56.0 3.35e-01 92.3% 58.6%
1ju2A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 57.0 3.50e-01 98.1% 53.9%
1sqhA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 51.0 3.89e-01 86.5% 46.6%
1d4cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 53.0 3.28e-01 92.3% 91.2%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.76e-01 100.0% 87.0%
7pk0A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 49.0 3.77e-01 86.5% 47.7%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.65 52.0 4.22e-01 94.2% 79.6%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.64 52.0 4.25e-01 92.3% 97.1%
1mo9A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 57.0 4.19e-01 100.0% 63.7%
5j60B02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 52.0 3.97e-01 90.4% 67.5%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 52.0 5.02e-01 100.0% 83.1%
3ab1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 55.0 4.19e-01 100.0% 96.0%
2aqjA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 53.0 3.04e-01 98.1% 39.8%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 44.0 4.13e-01 88.5% 62.7%
3irpX01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 43.0 3.12e-01 78.8% 68.4%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.84e-01 100.0% 86.7%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.59 50.0 3.26e-01 100.0% 42.0%
2wesA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 51.0 2.95e-01 98.1% 40.7%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.58 46.0 4.23e-01 88.5% 80.6%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 50.0 4.61e-01 100.0% 86.8%
2ox7A01 2.30.30.310 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.57 48.0 4.62e-01 100.0% 96.8%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 47.0 4.47e-01 100.0% 80.6%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 4.41e-01 100.0% 77.1%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.16e-01 100.0% 70.6%
2jz4A01 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.56 42.0 3.15e-01 84.6% 64.2%
7bsbI01 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.56 45.0 3.49e-01 92.3% 91.3%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.56 46.0 4.25e-01 100.0% 87.8%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.44e-01 100.0% 88.3%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.55 42.0 2.83e-01 100.0% 20.5%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 3.42e-01 100.0% 39.7%
1zgrA02 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.55 44.0 3.30e-01 94.2% 89.7%
3bc9A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.48e-01 84.6% 75.3%
2uvaG09 2.40.128.700 Mainly Beta › Beta Barrel › Lipocalin › 0.54 44.0 3.58e-01 100.0% 81.0%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.16e-01 100.0% 74.6%
6hhuA01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 4.03e-01 98.1% 69.2%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.54 42.0 3.81e-01 96.2% 73.2%
4okeA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 39.0 2.89e-01 80.8% 46.3%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 38.0 3.88e-01 84.6% 81.6%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 43.0 4.17e-01 100.0% 82.3%
4iglB00 2.180.10.10 Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core 0.53 46.0 2.59e-01 100.0% 45.9%
2vldA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.53 44.0 3.60e-01 100.0% 89.0%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.53 41.0 3.75e-01 88.5% 98.7%
2qggA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.53 40.0 3.46e-01 100.0% 50.5%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.53 42.0 3.39e-01 98.1% 90.2%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 44.0 3.66e-01 98.1% 66.0%
1zunB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 42.0 3.65e-01 100.0% 55.6%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 39.0 3.86e-01 92.3% 75.0%
3lkyA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.52 41.0 3.19e-01 90.4% 78.0%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.26e-01 86.5% 50.0%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 37.0 2.49e-01 86.5% 75.8%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 3.34e-01 100.0% 97.5%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 40.0 3.26e-01 88.5% 62.3%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3621211 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 51.0 5.54e-01 86.5% 95.0%
5035835 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.70 61.0 5.84e-01 100.0% 95.0%
3096910 2003.1.2.63 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N, GMC_oxred_C, NAD_binding_8 0.69 60.0 3.40e-01 98.1% 50.9%
3612090 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.81e-01 100.0% 88.3%
3581817 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.68 58.0 5.49e-01 100.0% 84.6%
4307735 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.68 60.0 3.55e-01 98.1% 87.3%
3616769 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.68 58.0 4.82e-01 100.0% 57.9%
4000622 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.68 58.0 4.51e-01 100.0% 45.8%
3794500 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.67 57.0 3.98e-01 100.0% 29.7%
3438573 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.67 58.0 3.29e-01 98.1% 40.7%
5027131 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.67 57.0 5.47e-01 98.1% 100.0%
3791305 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.66 50.0 3.44e-01 86.5% 30.2%
4330184 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.66 58.0 4.38e-01 100.0% 95.2%
3253561 213.1.1.19 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 0.65 49.0 3.63e-01 86.5% 41.3%
3390570 213.1.1.19 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 0.65 50.0 3.69e-01 88.5% 39.2%
4928169 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.64 53.0 5.25e-01 96.2% 100.0%
9277 2003.1.2.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.64 57.0 4.33e-01 100.0% 95.9%
1168367 11.1.5.48 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Big_8 0.64 46.0 3.26e-01 76.9% 64.8%
3517415 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.63 54.0 5.11e-01 100.0% 84.6%
5017073 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.63 53.0 3.92e-01 100.0% 35.3%
3762123 213.1.1.16 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.63 48.0 3.49e-01 86.5% 38.7%
4316044 101.1.2.388 alpha arrays › HTH › HTH › winged helix domain › YjhX_toxin 0.62 48.0 4.18e-01 90.4% 58.9%
5022848 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 5.00e-01 100.0% 83.3%
4629735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.83e-01 100.0% 75.4%
3716765 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 54.0 3.10e-01 100.0% 71.0%
3991073 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 46.0 4.58e-01 88.5% 78.2%
5045815 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 43.0 3.94e-01 75.0% 90.0%
3926118 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.61 51.0 4.95e-01 100.0% 93.3%
3976809 77.1.1.6 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 0.61 42.0 2.93e-01 73.1% 36.0%
3928430 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.60 48.0 4.52e-01 100.0% 71.4%
4578663 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.60 48.0 4.41e-01 90.4% 92.9%
3435006 4.1.1.308 beta barrels › SH3 › SH3 › SH3 › PF31073 0.59 49.0 4.70e-01 100.0% 90.8%
2674741 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.59 47.0 4.67e-01 90.4% 89.1%
3174528 244.1.1.11 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.59 49.0 2.95e-01 98.1% 45.4%
3283031 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.59 46.0 3.90e-01 90.4% 71.6%
5049906 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 40.0 3.89e-01 92.3% 63.3%
5068388 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.59 46.0 4.54e-01 88.5% 92.7%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.50e-01 100.0% 82.8%
3277860 4.1.1.368 beta barrels › SH3 › SH3 › SH3 › DUF3097_N 0.58 50.0 4.71e-01 100.0% 87.7%
3802227 2484.1.1.197 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 0.58 47.0 2.65e-01 96.2% 30.4%
4162406 244.1.1.11 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.58 48.0 2.82e-01 98.1% 37.6%
5018522 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.58 48.0 3.33e-01 100.0% 26.8%
4041343 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.58 45.0 4.58e-01 96.2% 94.0%
3877126 304.48.1.24 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.57 46.0 2.66e-01 96.2% 39.0%
3900017 4.1.1.284 beta barrels › SH3 › SH3 › SH3 › SBNO 0.57 44.0 3.58e-01 100.0% 41.7%
3967128 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.57 47.0 4.30e-01 94.2% 81.4%
5053906 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.56 47.0 4.56e-01 100.0% 86.7%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 47.0 4.56e-01 100.0% 95.0%
2642946 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.56 39.0 3.28e-01 86.5% 41.8%
4948433 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.56 45.0 4.23e-01 100.0% 75.0%
2541236 3820.1.1.0 a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain 0.55 43.0 3.80e-01 100.0% 72.9%
4940372 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.55 37.0 3.48e-01 82.7% 52.9%
1175108 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.55 45.0 3.68e-01 100.0% 58.0%
3470175 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.54 46.0 4.09e-01 100.0% 85.0%
1513837 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 41.0 3.95e-01 82.7% 83.3%
3221919 246.3.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.54 44.0 2.67e-01 96.2% 38.7%
3660912 76.1.1.2 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.54 38.0 2.98e-01 78.8% 41.5%
3453263 76.1.1.2 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.54 39.0 2.94e-01 84.6% 88.7%
3997935 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.53 43.0 3.56e-01 96.2% 81.9%
2390064 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.53 40.0 2.90e-01 90.4% 57.5%
3232211 11.2.1.58 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.51 40.0 2.80e-01 96.2% 62.4%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.51 39.0 3.63e-01 100.0% 64.0%
3175516 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.50 38.0 3.27e-01 90.4% 71.0%
D2 high residues 60-126
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09643.16 best YopX 33.6 5.10e-08 100.0% 57.8%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.90 82.0 8.01e-01 98.5% 91.8%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.72 58.0 5.63e-01 88.1% 98.6%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.70 52.0 5.69e-01 85.1% 98.1%
3nrlA00 2.40.10.390 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 53.0 5.29e-01 82.1% 83.8%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 50.0 4.86e-01 82.1% 94.7%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.64 51.0 4.86e-01 86.6% 97.5%
3qwuA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.64 43.0 3.18e-01 70.1% 81.7%
2yk0A03 1.20.58.1930 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 50.0 3.39e-01 83.6% 56.8%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.63 56.0 5.34e-01 98.5% 87.0%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.08e-01 73.1% 72.3%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.61 47.0 3.76e-01 83.6% 41.6%
1yzbA01 3.90.70.40 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.61 48.0 4.03e-01 89.6% 62.1%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.61 53.0 4.44e-01 98.5% 89.7%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.61 48.0 3.36e-01 88.1% 43.3%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 40.0 3.49e-01 71.6% 82.6%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.60 47.0 4.00e-01 86.6% 83.0%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.59 40.0 3.97e-01 73.1% 100.0%
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.58 44.0 4.20e-01 82.1% 88.7%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.58 44.0 4.17e-01 85.1% 93.9%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 41.0 3.38e-01 79.1% 98.5%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.57 45.0 4.00e-01 89.6% 97.1%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.57 47.0 4.65e-01 91.0% 98.6%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.56 42.0 3.79e-01 86.6% 56.4%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.56 44.0 4.02e-01 86.6% 95.5%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.56 47.0 3.86e-01 97.0% 83.5%
3qjlA02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 37.0 3.11e-01 70.1% 100.0%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 38.0 3.32e-01 71.6% 67.6%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 41.0 3.14e-01 82.1% 73.5%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.33e-01 88.1% 100.0%
3fqmA01 2.20.25.210 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B 0.55 38.0 4.02e-01 88.1% 82.0%
1a3wB03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.55 42.0 3.71e-01 82.1% 93.8%
3gg8C03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.55 41.0 3.64e-01 86.6% 54.6%
6zlvA01 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.55 38.0 3.65e-01 74.6% 63.6%
8eq1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.55 38.0 3.52e-01 80.6% 55.7%
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.54 39.0 3.51e-01 80.6% 55.6%
7r6yA01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.54 38.0 3.43e-01 80.6% 53.3%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 40.0 3.40e-01 83.6% 92.3%
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.52 37.0 3.55e-01 80.6% 63.6%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3264806 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 52.0 5.95e-01 71.6% 100.0%
4429179 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.75 49.0 5.79e-01 70.1% 100.0%
4957888 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.75 62.0 6.53e-01 92.5% 98.3%
5017637 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.74 58.0 6.31e-01 85.1% 100.0%
4938404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 55.0 6.00e-01 91.0% 96.4%
3609597 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.74 53.0 5.62e-01 86.6% 85.0%
3382832 4.1.1.302 beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O 0.73 60.0 4.35e-01 89.6% 85.6%
3598284 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.83e-01 94.0% 96.4%
3407180 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.33e-01 88.1% 95.3%
4665407 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.70 50.0 5.65e-01 82.1% 100.0%
4534931 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.70 50.0 4.84e-01 74.6% 66.7%
4965523 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 50.0 5.47e-01 76.1% 100.0%
4680376 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.70 53.0 5.77e-01 88.1% 100.0%
3495619 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.70 47.0 4.00e-01 70.1% 65.5%
4927153 375.1.1.63 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.69 40.0 4.34e-01 95.5% 69.1%
4974669 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.68 60.0 5.40e-01 95.5% 71.1%
3509362 220.1.1.160 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.68 46.0 4.13e-01 70.1% 76.6%
4533388 219.1.1.122 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28648 0.68 53.0 3.67e-01 85.1% 30.7%
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 52.0 5.18e-01 95.5% 80.0%
3231088 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.66 38.0 4.54e-01 74.6% 95.0%
4516378 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.66 51.0 5.04e-01 83.6% 82.9%
3389668 220.1.1.160 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.66 44.0 3.90e-01 70.1% 72.0%
4627221 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.65 51.0 5.16e-01 85.1% 86.2%
5035481 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.64 48.0 3.90e-01 83.6% 78.5%
3463325 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 47.0 3.18e-01 80.6% 34.5%
2448699 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 50.0 5.01e-01 85.1% 100.0%
3928760 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.62 47.0 2.94e-01 82.1% 23.9%
3982999 4.1.1.60 beta barrels › SH3 › SH3 › SH3 › YccV-like 0.62 55.0 4.85e-01 100.0% 86.0%
4024411 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 43.0 4.73e-01 76.1% 90.9%
3347851 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 45.0 4.46e-01 80.6% 75.7%
4965721 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.30e-01 92.5% 84.3%
1879626 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.61 41.0 2.86e-01 70.1% 42.0%
5069323 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 42.0 4.78e-01 98.5% 98.0%
4025294 4.1.1.60 beta barrels › SH3 › SH3 › SH3 › YccV-like 0.60 54.0 4.90e-01 98.5% 86.7%
4370909 9.4.1.1 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.60 50.0 4.60e-01 94.0% 91.1%
3975132 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 50.0 4.55e-01 91.0% 77.8%
5025255 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.60 47.0 4.52e-01 88.1% 92.5%
4434185 3804.1.1.1 alpha bundles › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › Cas13a_endoribonuclease 0.60 40.0 3.08e-01 70.1% 30.3%
None 0.58 50.0 3.20e-01 97.0% 21.8%
4572703 101.1.9.6 alpha arrays › HTH › HTH › Putative DNA-binding domain › KilA-N 0.58 44.0 3.47e-01 80.6% 86.7%
3980228 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 43.0 3.68e-01 86.6% 69.6%
4991056 375.1.1.63 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.57 40.0 4.36e-01 97.0% 89.1%
863 9.4.1.1 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.57 45.0 3.98e-01 89.6% 96.1%
4168024 6.1.1.0 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.56 41.0 3.20e-01 76.1% 93.6%
4235076 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.56 47.0 4.41e-01 91.0% 90.0%
3101373 3794.1.1.1 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT 0.56 47.0 3.77e-01 95.5% 79.4%
1124180 3794.1.1.1 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT 0.56 47.0 3.85e-01 97.0% 82.2%
3604406 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.56 40.0 3.08e-01 79.1% 32.9%
4078246 9.4.1.1 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.56 43.0 4.19e-01 86.6% 100.0%
3596767 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.55 41.0 3.62e-01 85.1% 53.0%
3940997 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 45.0 3.62e-01 91.0% 63.7%
3782195 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 41.0 3.79e-01 82.1% 96.5%
3172227 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.53 40.0 3.64e-01 82.1% 96.8%
3781314 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 42.0 3.81e-01 86.6% 96.7%
3177070 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.53 39.0 3.71e-01 79.1% 98.8%
3739976 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.53 43.0 3.99e-01 89.6% 97.6%
5015359 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.52 39.0 3.65e-01 82.1% 91.8%
3970026 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 44.0 2.90e-01 100.0% 37.1%