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NC_047948.1__YP_009800027.1__HOT02_gp187__00186

Bact-Vir

NC_047948.1__YP_009800027.1__HOT02_gp187__00186

Identity

Accession:
NC_047948 ↗
Kingdom:
phage

Quality

61.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-146
PDB
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.69 61.0 5.65e-01 98.1% 100.0%
2a9sB00 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.67 53.0 4.58e-01 86.4% 82.4%
2jrbA00 3.30.250.20 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain 0.67 38.0 4.63e-01 84.5% 89.2%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.64 46.0 4.09e-01 74.8% 83.2%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 35.0 4.22e-01 79.6% 85.5%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.63 47.0 4.74e-01 81.6% 78.4%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.62 46.0 4.97e-01 81.6% 91.0%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.60 50.0 4.49e-01 89.3% 83.7%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 45.0 4.10e-01 79.6% 76.4%
2g7jA00 3.90.1150.40 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 0.59 48.0 4.74e-01 89.3% 97.3%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 39.0 4.50e-01 83.5% 100.0%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 4.29e-01 85.4% 91.8%
2je6A01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.57 44.0 3.36e-01 84.5% 69.0%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 40.0 3.77e-01 74.8% 89.6%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.57 44.0 3.91e-01 82.5% 79.9%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 45.0 4.15e-01 91.3% 65.9%
2nn6C00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.56 44.0 3.34e-01 85.4% 68.9%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 44.0 3.75e-01 84.5% 66.3%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.56 42.0 3.85e-01 81.6% 95.0%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 43.0 4.06e-01 85.4% 75.0%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 39.0 2.73e-01 73.8% 34.8%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 43.0 3.74e-01 84.5% 64.6%
3ly1D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 44.0 4.03e-01 90.3% 66.7%
1whzA00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.55 35.0 4.06e-01 79.6% 94.2%
3ct8A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 42.0 3.89e-01 82.5% 86.5%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.47e-01 78.6% 84.8%
4lb8A02 2.60.40.3900 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 3.45e-01 71.8% 84.7%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.51e-01 78.6% 95.6%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.54 31.0 3.40e-01 90.3% 67.9%
3sc7X01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 45.0 3.16e-01 92.2% 92.3%
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 41.0 3.41e-01 81.6% 59.1%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 42.0 3.85e-01 85.4% 77.5%
3madA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 42.0 3.96e-01 92.2% 68.7%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 36.0 3.59e-01 72.8% 99.1%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 41.0 3.82e-01 93.2% 66.7%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.52 40.0 4.15e-01 84.5% 94.7%
4hesA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 45.0 3.30e-01 97.1% 65.8%
3v8uA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.51 34.0 3.64e-01 87.4% 80.0%
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 42.0 3.14e-01 92.2% 82.1%
1k38A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 41.0 3.17e-01 89.3% 79.9%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.50 41.0 3.19e-01 91.3% 67.7%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4028916 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.80 66.0 6.52e-01 88.3% 87.3%
3279654 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.80 70.0 6.37e-01 94.2% 94.1%
4344652 7503.1.1.0 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.72 55.0 5.36e-01 86.4% 72.2%
3944846 4312.1.1.4 a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.71 51.0 4.90e-01 74.8% 66.1%
3269736 331.4.1.1 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.70 48.0 5.16e-01 83.5% 81.1%
3229482 71.1.1.19 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.70 42.0 3.31e-01 71.8% 29.8%
5045407 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.70 65.0 5.95e-01 100.0% 100.0%
5008353 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.70 60.0 5.76e-01 94.2% 98.3%
4949872 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.70 60.0 5.54e-01 94.2% 100.0%
5028032 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.69 43.0 4.74e-01 81.6% 76.5%
5041453 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.68 43.0 4.75e-01 77.7% 77.6%
3533688 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 45.0 5.09e-01 83.5% 93.3%
3262446 331.4.1.1 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.66 47.0 4.91e-01 80.6% 81.7%
3825518 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 44.0 5.02e-01 84.5% 96.0%
4954762 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.65 59.0 5.54e-01 100.0% 100.0%
3291389 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.65 43.0 3.74e-01 74.8% 44.5%
4975431 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.64 42.0 4.51e-01 88.3% 76.7%
3242625 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.64 48.0 4.69e-01 77.7% 73.6%
3257727 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.64 56.0 5.17e-01 98.1% 76.2%
3935896 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.62 47.0 4.35e-01 79.6% 63.1%
4139943 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.61 43.0 3.78e-01 72.8% 74.8%
3420606 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.61 53.0 3.62e-01 94.2% 85.5%
3610630 71.1.1.19 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.60 44.0 3.41e-01 76.7% 75.3%
3307575 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.60 42.0 4.27e-01 79.6% 74.0%
3972703 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.60 43.0 4.35e-01 75.7% 95.2%
3271044 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.59 44.0 3.95e-01 76.7% 83.6%
6638 241.7.1.2 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › DUF2002 0.59 48.0 4.74e-01 89.3% 97.3%
4883923 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.59 40.0 4.73e-01 81.6% 100.0%
3199320 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.58 45.0 4.42e-01 84.5% 99.1%
3947082 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 40.0 4.22e-01 71.8% 100.0%
3225336 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 40.0 3.60e-01 71.8% 93.1%
4279385 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.57 44.0 4.45e-01 82.5% 97.1%
3733036 4019.1.1.1 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.57 47.0 3.21e-01 90.3% 82.7%
3226497 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.56 40.0 3.91e-01 74.8% 77.4%
5045854 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.55 40.0 4.46e-01 99.0% 100.0%
3273903 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.54 46.0 3.24e-01 94.2% 52.3%
3833570 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.54 39.0 3.05e-01 74.8% 58.7%
4204450 2004.1.1.442 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 0.54 41.0 2.84e-01 79.6% 75.3%
3497302 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 40.0 3.63e-01 78.6% 72.1%
4085391 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 43.0 3.61e-01 88.3% 80.3%
5053600 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.52 42.0 3.90e-01 86.4% 73.1%
3786550 5.1.4.219 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N 0.52 43.0 2.80e-01 90.3% 26.9%
3217533 883.1.1.2 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.52 42.0 3.08e-01 88.3% 75.9%
3534499 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.52 36.0 3.24e-01 70.9% 97.2%
5048592 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 42.0 3.92e-01 90.3% 70.8%
4325844 5085.1.1.2 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 0.51 44.0 2.89e-01 93.2% 64.7%
3998281 883.1.1.2 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.51 37.0 2.84e-01 73.8% 45.1%
D2 high residues 259-328
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.77 57.0 3.87e-01 77.1% 48.2%
5upiA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.76 55.0 3.99e-01 77.1% 55.3%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.74 53.0 4.24e-01 78.6% 38.8%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.73 60.0 4.46e-01 97.1% 35.8%
5swiD01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.73 54.0 3.66e-01 78.6% 49.2%
3qmfA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.70 50.0 3.98e-01 74.3% 96.3%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.70 56.0 4.69e-01 94.3% 51.7%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.69 56.0 4.18e-01 97.1% 35.0%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.69 61.0 4.87e-01 100.0% 75.5%
3auxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 61.0 3.84e-01 98.6% 34.5%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.66 51.0 3.71e-01 82.9% 82.7%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.66 57.0 4.40e-01 97.1% 59.2%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 44.0 3.20e-01 71.4% 45.9%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 44.0 3.22e-01 71.4% 47.4%
3b8bA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.63 57.0 4.34e-01 100.0% 95.6%
2erfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 49.0 3.48e-01 84.3% 84.2%
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 55.0 4.10e-01 100.0% 55.7%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 44.0 3.19e-01 75.7% 78.0%
5ji7A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.62 49.0 3.61e-01 88.6% 85.4%
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 50.0 3.44e-01 95.7% 73.9%
3e9mB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 47.0 3.45e-01 87.1% 77.3%
3imoC00 3.30.920.70 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › 0.59 49.0 4.33e-01 100.0% 61.7%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 49.0 3.86e-01 92.9% 73.3%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.59 47.0 3.78e-01 85.7% 87.3%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 45.0 3.31e-01 81.4% 66.5%
3hbkA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.59 46.0 3.21e-01 85.7% 90.9%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.58 51.0 3.89e-01 95.7% 79.9%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.58 49.0 3.69e-01 97.1% 55.4%
3sh4A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 50.0 3.53e-01 91.4% 73.3%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 50.0 3.87e-01 94.3% 92.1%
5c33A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.58 51.0 3.75e-01 97.1% 76.1%
3pveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 3.51e-01 91.4% 61.1%
2wsuB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 3.95e-01 100.0% 71.5%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.94e-01 100.0% 69.6%
7b2sA01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.56 45.0 3.64e-01 94.3% 83.9%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.96e-01 98.6% 67.7%
2wjsA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.47e-01 91.4% 67.4%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.42e-01 92.9% 56.0%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.29e-01 94.3% 93.0%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.55 46.0 3.20e-01 91.4% 87.9%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.80e-01 100.0% 73.6%
5z0uA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 45.0 4.31e-01 100.0% 98.9%
1h30A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 43.0 3.20e-01 90.0% 55.8%
4ym3C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 47.0 3.84e-01 100.0% 70.0%
2h0bC00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.41e-01 92.9% 74.3%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.87e-01 100.0% 73.1%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 46.0 3.89e-01 95.7% 67.5%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 45.0 3.74e-01 90.0% 76.3%
2r16A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.38e-01 91.4% 76.0%
2wjsA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 3.26e-01 90.0% 61.2%
3hkzG00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 45.0 3.82e-01 91.4% 92.9%
3kl0D01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 46.0 4.09e-01 100.0% 66.0%
4aeeA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 48.0 4.89e-01 97.1% 100.0%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.54 44.0 3.49e-01 100.0% 43.2%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 44.0 3.99e-01 100.0% 90.2%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.19e-01 97.1% 76.0%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 43.0 4.08e-01 98.6% 96.6%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.52 45.0 3.10e-01 98.6% 33.6%
3u1xA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 42.0 3.14e-01 100.0% 62.2%
1uokA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 42.0 4.13e-01 97.1% 100.0%
2wjsA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.40e-01 97.1% 75.2%
1cgtA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 44.0 4.02e-01 100.0% 96.8%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.06e-01 92.9% 48.4%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044200 289.1.1.0 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase 0.78 54.0 4.04e-01 71.4% 60.0%
4404709 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.77 63.0 4.63e-01 98.6% 35.4%
4956163 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.76 62.0 4.50e-01 87.1% 38.3%
4136961 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.75 55.0 4.09e-01 78.6% 34.3%
3993048 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.74 60.0 5.07e-01 94.3% 54.5%
2538670 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.73 51.0 5.62e-01 72.9% 96.3%
4064755 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.73 58.0 4.34e-01 97.1% 35.3%
1275015 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.73 59.0 5.16e-01 94.3% 59.8%
3236870 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 60.0 4.87e-01 91.4% 53.1%
3231343 77.1.1.10 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › PF28998 0.72 49.0 4.02e-01 77.1% 38.5%
3536576 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.71 58.0 5.39e-01 94.3% 71.8%
4419937 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.71 51.0 4.75e-01 74.3% 67.1%
4021604 3385.1.1.0 beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 0.70 61.0 4.99e-01 94.3% 63.2%
3387155 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.69 53.0 3.80e-01 81.4% 74.4%
4568749 2004.1.1.585 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_21, AAA_23 0.69 59.0 3.78e-01 95.7% 34.6%
5014331 2004.1.1.293 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.69 59.0 3.39e-01 95.7% 16.5%
200115 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.69 51.0 3.98e-01 78.6% 90.5%
3230371 3180.1.1.0 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.69 60.0 5.17e-01 97.1% 62.7%
3233897 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 58.0 4.78e-01 92.9% 53.3%
3220737 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.69 57.0 3.75e-01 91.4% 22.6%
3219284 2484.1.1.190 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 0.69 59.0 3.90e-01 92.9% 24.5%
4544568 719.1.1.5 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.68 51.0 4.35e-01 78.6% 75.5%
3556145 10.1.1.35 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.68 52.0 3.65e-01 81.4% 38.1%
2581425 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.68 48.0 5.28e-01 74.3% 98.2%
3793430 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.68 49.0 4.42e-01 75.7% 70.5%
3931562 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.68 58.0 4.00e-01 92.9% 52.9%
3550970 719.1.1.5 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.68 50.0 4.32e-01 78.6% 75.5%
3233815 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.67 52.0 3.55e-01 98.6% 22.8%
3738512 12.3.1.9 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_81 0.67 50.0 3.25e-01 80.0% 59.7%
3288669 331.3.1.27 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.67 60.0 4.55e-01 98.6% 68.1%
4612221 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.67 58.0 4.17e-01 100.0% 33.7%
3415592 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.67 59.0 4.63e-01 100.0% 77.3%
5013018 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.66 55.0 4.41e-01 88.6% 50.8%
3224579 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 56.0 3.61e-01 95.7% 20.7%
3597007 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.66 50.0 3.80e-01 82.9% 50.9%
3794738 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 49.0 3.54e-01 80.0% 62.6%
4408461 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.65 50.0 3.83e-01 92.9% 33.3%
4113728 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.65 46.0 3.19e-01 72.9% 35.1%
3228083 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 54.0 3.68e-01 100.0% 25.0%
3412604 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.65 55.0 3.52e-01 94.3% 35.1%
3900564 9.13.1.7 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Pep_M12B_propep 0.65 55.0 4.74e-01 97.1% 98.3%
3228995 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.65 53.0 3.14e-01 91.4% 12.0%
3929502 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.64 50.0 4.58e-01 88.6% 62.8%
3952398 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.64 48.0 3.19e-01 81.4% 27.5%
3519316 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.64 47.0 3.58e-01 78.6% 83.6%
3224967 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.64 53.0 3.63e-01 92.9% 25.9%
3497350 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.63 44.0 3.23e-01 72.9% 44.7%
3221927 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.63 55.0 3.66e-01 100.0% 23.8%
3239994 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.63 52.0 3.44e-01 91.4% 23.5%
3792180 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 44.0 4.39e-01 77.1% 96.0%
3715774 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 55.0 4.17e-01 97.1% 80.6%
3496295 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.61 49.0 3.48e-01 90.0% 79.1%
3211631 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 53.0 3.59e-01 100.0% 26.0%
3618917 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 45.0 3.89e-01 80.0% 78.2%
3967111 3338.2.1.2 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin 0.60 46.0 3.91e-01 88.6% 48.0%
3225189 5.1.4.369 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N 0.60 50.0 2.83e-01 92.9% 38.5%
3229613 12.1.1.31 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_59M 0.60 53.0 4.67e-01 100.0% 80.0%
3388516 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 45.0 3.29e-01 80.0% 66.1%
119405 3089.1.1.1 a+b two layers › Integron cassette protein VCH_CASS14 › Integron cassette protein VCH_CASS14 › Integron cassette protein VCH_CASS14 › VCH_CASS14 0.59 51.0 4.43e-01 100.0% 62.3%
3326365 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 51.0 3.46e-01 97.1% 68.9%
1487392 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.58 51.0 3.89e-01 95.7% 79.9%
4938030 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.14e-01 100.0% 78.2%
3218903 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.57 43.0 3.22e-01 100.0% 28.6%
3616765 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 45.0 3.23e-01 87.1% 62.0%
3481058 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 46.0 3.29e-01 91.4% 60.0%
3598346 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 47.0 3.64e-01 94.3% 85.4%
3990502 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 48.0 2.95e-01 97.1% 27.9%
3710432 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.55 47.0 3.58e-01 98.6% 78.3%
3507419 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 47.0 3.49e-01 100.0% 55.3%
3783443 109.2.1.70 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_92, Glyco_hydro_92N 0.54 44.0 2.59e-01 94.3% 24.0%
5792 295.1.1.6 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.54 46.0 3.88e-01 95.7% 66.9%
5013680 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 45.0 3.38e-01 97.1% 77.4%
5044469 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.53 42.0 3.48e-01 88.6% 94.6%
4966098 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.53 45.0 4.40e-01 94.3% 96.0%