←Back to structures

NC_047956.1__YP_009800606.1__HOT10_gp11__00011

Bact-Vir

NC_047956.1__YP_009800606.1__HOT10_gp11__00011

Identity

Accession:
NC_047956 ↗
Kingdom:
phage

Quality

72.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autosignataviridae› Nerthusvirus› Pseudomonas_phage_Achelous

TaxID: 2163982

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-153
PDB
Domain cluster: rep: KJ502657.1__AHN84683.1__PV_032__00032__D29-120
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 42.0 3.79e-01 78.6% 44.4%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 39.0 3.96e-01 78.6% 56.0%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.65 46.0 4.98e-01 78.6% 90.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 40.0 4.56e-01 77.6% 85.7%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 42.0 4.96e-01 75.5% 100.0%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 40.0 4.37e-01 79.6% 78.9%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 33.0 4.13e-01 78.6% 100.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 38.0 4.40e-01 81.6% 94.0%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.58 39.0 4.33e-01 80.6% 89.5%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.58 39.0 4.26e-01 79.6% 88.2%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.19e-01 82.7% 78.9%
1jqpA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 43.0 3.31e-01 80.6% 39.5%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.52 41.0 2.75e-01 83.7% 56.6%
7r9xA02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.50 37.0 2.86e-01 77.6% 88.5%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 37.0 3.41e-01 79.6% 96.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3701345 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 54.0 5.96e-01 78.6% 92.5%
3768116 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.70 42.0 3.26e-01 78.6% 27.4%
3553413 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.70 42.0 4.52e-01 78.6% 69.4%
3876680 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.67 41.0 4.08e-01 80.6% 59.0%
4253206 4.1.1.127 ↗ beta barrels › SH3 › SH3 › SH3 › DtxR 0.67 47.0 4.90e-01 79.6% 80.0%
3958137 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 47.0 4.87e-01 79.6% 80.0%
3864347 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 42.0 4.96e-01 76.5% 100.0%
3531894 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 41.0 4.91e-01 75.5% 98.5%
3730835 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.63 40.0 4.12e-01 79.6% 66.3%
3591824 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 39.0 4.45e-01 75.5% 87.1%
3843359 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.61 40.0 4.26e-01 79.6% 76.5%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.60 35.0 3.14e-01 79.6% 37.9%
4238585 375.1.4.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C 0.59 33.0 4.10e-01 73.5% 96.3%
3706361 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.14e-01 80.6% 66.4%
151019 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.59 36.0 3.84e-01 78.6% 70.6%
3901117 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.57 39.0 3.23e-01 88.8% 38.3%
3351841 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.56 50.0 4.59e-01 100.0% 91.5%
3450257 4.1.1.150 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3123 0.55 37.0 3.76e-01 79.6% 69.5%
3398585 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 47.0 4.28e-01 95.9% 90.8%
3658750 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.54 46.0 4.31e-01 95.9% 91.2%
3680900 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.53 46.0 4.32e-01 95.9% 90.8%
3712451 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 37.0 3.47e-01 81.6% 57.6%
3651121 331.3.1.31 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1990 0.52 40.0 3.15e-01 82.7% 85.2%
4343392 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 44.0 4.29e-01 94.9% 100.0%
4190434 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.51 42.0 3.36e-01 93.9% 74.9%