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NC_048007.1__YP_009805190.1__HOT61_gp071__00071
Bact-VirNC_048007.1__YP_009805190.1__HOT61_gp071__00071
Identity
- Accession:
- NC_048007 ↗
- Kingdom:
- phage
Quality
72.3
mean pLDDT
Taxonomy
TaxID: 2231345
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-61
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6hxqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 55.0 | 4.14e-01 | 98.0% | 34.1% |
| 2zqeA00 | 3.30.1370.110 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.68 | 58.0 | 5.03e-01 | 100.0% | 90.0% |
| 2k5tA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.67 | 58.0 | 4.34e-01 | 100.0% | 48.4% |
| 4i5sA01 | 1.10.8.500 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase | 0.67 | 48.0 | 4.47e-01 | 80.0% | 60.0% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.66 | 55.0 | 5.03e-01 | 98.0% | 81.4% |
| 1vx7600 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.66 | 57.0 | 4.64e-01 | 100.0% | 77.6% |
| 1x7dA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 54.0 | 3.81e-01 | 96.0% | 29.4% |
| 2o0bA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.66 | 53.0 | 3.64e-01 | 100.0% | 43.7% |
| 2fphX01 | 3.30.1370.160 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.64 | 54.0 | 4.79e-01 | 100.0% | 77.9% |
| 3f4lA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 50.0 | 3.92e-01 | 92.0% | 95.0% |
| 2heuB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 55.0 | 3.80e-01 | 100.0% | 45.3% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.63 | 51.0 | 3.06e-01 | 98.0% | 50.6% |
| 3c7jA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 4.36e-01 | 100.0% | 79.1% |
| 3zx4A02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.62 | 50.0 | 4.18e-01 | 88.0% | 88.5% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.61 | 50.0 | 4.32e-01 | 100.0% | 72.4% |
| 7m0oA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.60 | 49.0 | 3.49e-01 | 100.0% | 52.2% |
| 1cf7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 4.56e-01 | 98.0% | 83.6% |
| 4yo2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 4.49e-01 | 100.0% | 85.9% |
| 4onyA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 48.0 | 3.02e-01 | 100.0% | 15.8% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 3.97e-01 | 100.0% | 59.4% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 4.32e-01 | 96.0% | 85.9% |
| 3gwzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 3.92e-01 | 92.0% | 61.8% |
| 3dpuA03 | 1.10.10.2200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 47.0 | 4.24e-01 | 98.0% | 78.7% |
| 3zhgA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.57 | 49.0 | 3.68e-01 | 100.0% | 71.2% |
| 2vuvA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.57 | 47.0 | 3.60e-01 | 98.0% | 85.3% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 3.80e-01 | 100.0% | 65.0% |
| 1jznA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.56 | 47.0 | 3.50e-01 | 98.0% | 89.6% |
| 1i6uA01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 44.0 | 4.19e-01 | 100.0% | 82.4% |
| 4uwwA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.55 | 46.0 | 3.50e-01 | 98.0% | 89.2% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.83e-01 | 96.0% | 71.8% |
| 1xqaA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 46.0 | 3.61e-01 | 94.0% | 71.8% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 4.11e-01 | 98.0% | 92.2% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.83e-01 | 96.0% | 91.3% |
| 5w3gA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.45e-01 | 98.0% | 72.7% |
| 1sb2B00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.52 | 43.0 | 3.38e-01 | 100.0% | 87.1% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.76e-01 | 100.0% | 82.1% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.73e-01 | 100.0% | 82.5% |
| 1vk1A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.50 | 40.0 | 3.32e-01 | 96.0% | 74.5% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3430977 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.78 | 67.0 | 4.56e-01 | 96.0% | 51.7% |
| 3410614 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.71 | 61.0 | 4.85e-01 | 100.0% | 56.2% |
| 3201104 | 109.4.1.142 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CSN8_PSD8_EIF3K | 0.69 | 57.0 | 3.86e-01 | 94.0% | 45.1% |
| 3785289 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.69 | 58.0 | 5.42e-01 | 100.0% | 90.8% |
| 3657448 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.69 | 59.0 | 4.34e-01 | 100.0% | 46.4% |
| 3637371 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.69 | 58.0 | 4.68e-01 | 100.0% | 54.3% |
| 4014318 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.68 | 58.0 | 4.95e-01 | 100.0% | 67.1% |
| None | — | 0.68 | 57.0 | 4.01e-01 | 100.0% | 73.6% | |
| 3260870 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.68 | 57.0 | 4.77e-01 | 98.0% | 63.3% |
| 4981134 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.67 | 55.0 | 5.06e-01 | 98.0% | 85.7% |
| 3802943 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.67 | 54.0 | 4.98e-01 | 96.0% | 81.4% |
| 4012905 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.67 | 55.0 | 4.81e-01 | 100.0% | 69.4% |
| 3653143 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.67 | 56.0 | 4.93e-01 | 100.0% | 89.9% |
| 4968658 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.67 | 55.0 | 4.97e-01 | 100.0% | 84.0% |
| 3780948 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.66 | 56.0 | 4.59e-01 | 100.0% | 60.0% |
| 3403645 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.66 | 56.0 | 5.29e-01 | 98.0% | 93.3% |
| 4011288 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 54.0 | 5.17e-01 | 98.0% | 95.0% |
| 3698196 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.65 | 55.0 | 4.66e-01 | 100.0% | 68.9% |
| 4228350 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.65 | 54.0 | 5.10e-01 | 100.0% | 89.2% |
| 3958063 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 54.0 | 4.44e-01 | 96.0% | 56.8% |
| 3595328 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.64 | 55.0 | 4.41e-01 | 100.0% | 55.2% |
| 4134856 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.64 | 51.0 | 3.57e-01 | 100.0% | 44.9% |
| 4976487 | 2003.1.1.392 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PF27252 | 0.63 | 55.0 | 3.52e-01 | 100.0% | 55.3% |
| 3781365 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.61 | 52.0 | 4.63e-01 | 98.0% | 84.0% |
| 3561915 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.61 | 51.0 | 4.58e-01 | 100.0% | 81.3% |
| 1298450 | 328.7.1.1 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain › Smr | 0.59 | 46.0 | 4.17e-01 | 100.0% | 78.0% |
| 3586949 | 2006.1.1.37 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 | 0.59 | 51.0 | 3.21e-01 | 98.0% | 35.7% |
| 4414365 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.57 | 48.0 | 3.37e-01 | 98.0% | 86.1% |
| 3402524 | 101.1.2.186 ↗ | alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH | 0.56 | 45.0 | 3.81e-01 | 98.0% | 87.4% |
| 4474140 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.56 | 44.0 | 4.21e-01 | 100.0% | 89.2% |
| 5080207 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 43.0 | 3.06e-01 | 96.0% | 46.0% |
| 3625572 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.55 | 45.0 | 3.34e-01 | 92.0% | 85.9% |
| 3879574 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.55 | 46.0 | 3.43e-01 | 98.0% | 79.3% |
| 4369968 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.54 | 45.0 | 3.36e-01 | 100.0% | 80.7% |
| 3924892 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.54 | 44.0 | 3.43e-01 | 96.0% | 91.7% |
| 4325004 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.54 | 42.0 | 3.80e-01 | 100.0% | 71.2% |
| 3442602 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.54 | 41.0 | 3.54e-01 | 98.0% | 70.0% |
| 3165017 | 101.1.2.142 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 | 0.53 | 43.0 | 3.70e-01 | 100.0% | 74.4% |
| 3918019 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.53 | 43.0 | 3.21e-01 | 100.0% | 83.3% |
| 4442028 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.51 | 41.0 | 3.13e-01 | 100.0% | 82.1% |
| 5043392 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.51 | 42.0 | 3.90e-01 | 94.0% | 83.1% |
| 3964341 | 101.1.2.142 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 | 0.51 | 41.0 | 3.61e-01 | 100.0% | 80.0% |
| 3237702 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 38.0 | 3.48e-01 | 98.0% | 60.0% |