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NC_048016.1__YP_009806595.1__HOT70_gp190__00103
Bact-VirNC_048016.1__YP_009806595.1__HOT70_gp190__00103
Identity
- Accession:
- NC_048016 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Wellingtonvirus›
Erwinia_phage_Wellington
TaxID: 2267653
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-68
Domain cluster:
rep: KX397372.1__ANZ50278.1__PHOBOS_88__00088__D11-67
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hrzB00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 47.0 | 3.75e-01 | 72.4% | 82.1% |
| 6bg2A02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.69 | 48.0 | 3.78e-01 | 75.9% | 34.4% |
| 3dxpA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 50.0 | 4.33e-01 | 100.0% | 52.7% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 50.0 | 3.77e-01 | 87.9% | 71.8% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.63 | 46.0 | 4.54e-01 | 91.4% | 73.0% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 55.0 | 4.66e-01 | 100.0% | 70.1% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 45.0 | 4.46e-01 | 100.0% | 71.9% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 54.0 | 4.21e-01 | 100.0% | 70.5% |
| 4s3nA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 51.0 | 3.82e-01 | 93.1% | 73.5% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.18e-01 | 96.6% | 67.9% |
| 6cnhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 43.0 | 3.88e-01 | 100.0% | 53.8% |
| 8hbfB01 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.60 | 43.0 | 3.10e-01 | 77.6% | 65.7% |
| 1cwvA04 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 48.0 | 4.19e-01 | 91.4% | 96.7% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 48.0 | 4.09e-01 | 89.7% | 56.4% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 46.0 | 3.12e-01 | 100.0% | 48.0% |
| 4d9uA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 40.0 | 3.59e-01 | 81.0% | 51.1% |
| 4fg9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 39.0 | 3.62e-01 | 74.1% | 54.4% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.56 | 46.0 | 4.14e-01 | 93.1% | 76.2% |
| 2xetB00 | 2.60.40.2070 | Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain | 0.56 | 49.0 | 4.29e-01 | 100.0% | 75.0% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.56 | 45.0 | 3.48e-01 | 100.0% | 36.4% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.56 | 47.0 | 2.96e-01 | 100.0% | 18.2% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 46.0 | 3.71e-01 | 100.0% | 87.1% |
| 4h61A00 | 3.10.450.580 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mediator complex, subunit Med6 | 0.54 | 46.0 | 3.61e-01 | 100.0% | 59.9% |
| 2e3nA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 42.0 | 2.98e-01 | 94.8% | 68.4% |
| 2psoB02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 41.0 | 3.13e-01 | 93.1% | 50.6% |
| 3f3fD01 | 2.20.25.500 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 41.0 | 4.24e-01 | 100.0% | 100.0% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.53 | 45.0 | 2.93e-01 | 100.0% | 24.2% |
| 2b5iC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 3.95e-01 | 100.0% | 90.6% |
| 1in0A02 | 3.30.70.990 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 | 0.53 | 38.0 | 3.34e-01 | 82.8% | 48.9% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 44.0 | 4.02e-01 | 100.0% | 70.2% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 2.79e-01 | 100.0% | 19.8% |
| 3hn3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 3.65e-01 | 94.8% | 82.7% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.50 | 43.0 | 3.18e-01 | 100.0% | 50.6% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3175957 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.73 | 47.0 | 2.83e-01 | 100.0% | 9.9% |
| 3199763 | 220.1.1.202 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N | 0.70 | 50.0 | 3.88e-01 | 89.7% | 35.2% |
| 3288021 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.69 | 52.0 | 3.64e-01 | 100.0% | 26.1% |
| 3559665 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.68 | 47.0 | 3.58e-01 | 100.0% | 31.5% |
| 3906579 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.66 | 45.0 | 3.51e-01 | 98.3% | 32.8% |
| 4020694 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.66 | 58.0 | 3.62e-01 | 100.0% | 22.8% |
| 3741704 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.65 | 56.0 | 4.41e-01 | 100.0% | 86.9% |
| 3896065 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.64 | 56.0 | 3.53e-01 | 100.0% | 18.7% |
| 1323413 | 330.10.1.1 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO | 0.64 | 51.0 | 4.24e-01 | 94.8% | 50.0% |
| 1560737 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.64 | 45.0 | 4.36e-01 | 77.6% | 82.6% |
| 4009433 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 44.0 | 2.70e-01 | 74.1% | 19.5% |
| 3980078 | 274.1.1.24 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSppdC | 0.63 | 44.0 | 4.19e-01 | 74.1% | 80.0% |
| 3205897 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.62 | 55.0 | 3.44e-01 | 100.0% | 21.8% |
| 2400350 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.62 | 41.0 | 2.60e-01 | 79.3% | 11.6% |
| 3732875 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.61 | 44.0 | 3.48e-01 | 81.0% | 34.3% |
| 3264903 | 3195.1.1.1 ↗ | extended segments › Mediator of RNA polymerase II transcription subunit 6 › Mediator of RNA polymerase II transcription subunit 6 › Mediator of RNA polymerase II transcription subunit 6 › Med6 | 0.61 | 53.0 | 4.06e-01 | 100.0% | 53.6% |
| 1514625 | 316.1.1.20 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › OAS1_C | 0.61 | 51.0 | 3.60e-01 | 93.1% | 59.0% |
| 3783070 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.61 | 53.0 | 3.30e-01 | 100.0% | 41.1% |
| 4019913 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.61 | 43.0 | 3.57e-01 | 100.0% | 40.7% |
| 3963078 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.60 | 40.0 | 3.65e-01 | 70.7% | 87.1% |
| 3593376 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 48.0 | 4.13e-01 | 89.7% | 57.9% |
| 3591269 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.60 | 50.0 | 3.23e-01 | 100.0% | 40.9% |
| 3510918 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.59 | 52.0 | 4.00e-01 | 100.0% | 47.4% |
| 2088429 | 1148.1.1.0 ↗ | a+b two layers › Cell wall binding protein cwp8 domain 2 › Cell wall binding protein cwp8 domain 2 › Cell wall binding protein cwp8 domain 2 | 0.59 | 45.0 | 3.88e-01 | 100.0% | 51.6% |
| 3592743 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 43.0 | 3.85e-01 | 96.6% | 56.2% |
| 3937869 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 53.0 | 4.47e-01 | 100.0% | 72.6% |
| 3254541 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 48.0 | 4.03e-01 | 96.6% | 75.5% |
| 3803793 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.58 | 49.0 | 3.18e-01 | 100.0% | 22.4% |
| 5011673 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 45.0 | 3.68e-01 | 89.7% | 44.3% |
| 4201712 | 243.3.1.37 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF4901 | 0.58 | 45.0 | 4.41e-01 | 100.0% | 81.5% |
| 3575411 | 11.1.1.590 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig15 | 0.57 | 46.0 | 3.87e-01 | 89.7% | 73.0% |
| 3457651 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 40.0 | 2.63e-01 | 79.3% | 18.0% |
| 5067976 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 3.98e-01 | 94.8% | 81.0% |
| 3879945 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 3.97e-01 | 100.0% | 75.0% |
| 3489196 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.55 | 44.0 | 3.09e-01 | 94.8% | 40.9% |
| 3187473 | 7579.1.1.101 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, Abhydrolase_3, BD-FAE | 0.55 | 44.0 | 2.78e-01 | 87.9% | 24.5% |
| 3833124 | 11.1.1.1101 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28658 | 0.55 | 46.0 | 3.84e-01 | 94.8% | 82.9% |
| 3501861 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 41.0 | 3.44e-01 | 82.8% | 58.1% |
| 3519202 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 4.19e-01 | 100.0% | 76.7% |
| 3255196 | 4970.1.1.28 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › SPC25 | 0.54 | 47.0 | 3.95e-01 | 100.0% | 61.2% |
| 4027680 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.54 | 47.0 | 3.57e-01 | 100.0% | 51.7% |
| 5059268 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 3.71e-01 | 94.8% | 74.5% |
| 3471731 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 40.0 | 2.61e-01 | 84.5% | 69.5% |
| 3712208 | 2484.8.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) | 0.53 | 45.0 | 2.95e-01 | 100.0% | 33.3% |
| 4938125 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.52 | 40.0 | 3.65e-01 | 87.9% | 75.3% |
| 3635749 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.52 | 44.0 | 3.28e-01 | 100.0% | 80.6% |
| 5016404 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.52 | 42.0 | 3.94e-01 | 100.0% | 71.2% |
| 5038236 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.52 | 43.0 | 3.54e-01 | 94.8% | 79.1% |
| 3710275 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 36.0 | 2.45e-01 | 96.6% | 17.9% |
| 3501432 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 42.0 | 3.42e-01 | 100.0% | 47.3% |
| 3561487 | 223.1.1.108 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › VGCC_alpha2, PF30670 | 0.52 | 39.0 | 2.28e-01 | 81.0% | 19.8% |
| None | — | 0.52 | 38.0 | 2.49e-01 | 84.5% | 26.5% | |
| 5009887 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 42.0 | 3.43e-01 | 100.0% | 96.8% |
| 3931749 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 37.0 | 2.41e-01 | 82.8% | 15.1% |
| 4606701 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.51 | 40.0 | 2.60e-01 | 94.8% | 22.1% |
| 3323289 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 34.0 | 3.26e-01 | 70.7% | 61.4% |
D2
high
residues 72-160
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lmlA01 | 3.10.450.690 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 54.0 | 4.95e-01 | 100.0% | 81.0% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 43.0 | 4.19e-01 | 79.8% | 78.6% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 42.0 | 4.42e-01 | 75.3% | 84.8% |
| 1yuaA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.58 | 34.0 | 3.94e-01 | 79.8% | 86.2% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 41.0 | 3.44e-01 | 85.4% | 42.5% |
| 2kxgA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 39.0 | 3.86e-01 | 74.2% | 71.6% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.55 | 34.0 | 3.99e-01 | 96.6% | 98.2% |
| 1n2bB02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.54 | 49.0 | 4.68e-01 | 100.0% | 97.1% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 34.0 | 3.46e-01 | 94.4% | 62.9% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 4.08e-01 | 96.6% | 89.3% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 38.0 | 3.54e-01 | 75.3% | 71.9% |
| 3hi2B00 | 3.30.2310.40 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › | 0.53 | 37.0 | 3.68e-01 | 74.2% | 88.7% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 32.0 | 2.98e-01 | 78.7% | 46.0% |
| 1kw3B02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 32.0 | 2.80e-01 | 96.6% | 36.4% |
| 1f89A00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.51 | 42.0 | 3.15e-01 | 97.8% | 77.9% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 32.0 | 3.61e-01 | 92.1% | 87.7% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 41.0 | 3.47e-01 | 89.9% | 86.4% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.50 | 36.0 | 3.47e-01 | 76.4% | 87.5% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995812 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.68 | 60.0 | 5.84e-01 | 98.9% | 96.0% |
| 3703176 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.68 | 32.0 | 4.30e-01 | 78.7% | 88.6% |
| 4020677 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.67 | 44.0 | 3.82e-01 | 73.0% | 43.7% |
| 3804385 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 33.0 | 3.92e-01 | 70.8% | 73.3% |
| 3833240 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.63 | 48.0 | 4.79e-01 | 100.0% | 79.6% |
| 2770657 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.62 | 29.0 | 4.03e-01 | 98.9% | 97.5% |
| 386335 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.59 | 50.0 | 4.68e-01 | 96.6% | 84.2% |
| 3841163 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.59 | 51.0 | 5.12e-01 | 100.0% | 94.4% |
| 3712993 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 36.0 | 3.84e-01 | 77.5% | 72.0% |
| 3807026 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 41.0 | 3.10e-01 | 74.2% | 34.9% |
| 3720660 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 38.0 | 4.04e-01 | 93.3% | 80.0% |
| 4524129 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.57 | 39.0 | 3.88e-01 | 71.9% | 70.5% |
| 3283095 | 4321.1.1.0 ↗ | a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region | 0.56 | 41.0 | 3.23e-01 | 78.7% | 43.6% |
| 3599554 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.55 | 45.0 | 3.80e-01 | 88.8% | 83.3% |
| 3645007 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.55 | 41.0 | 4.17e-01 | 78.7% | 89.4% |
| 4981911 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.55 | 49.0 | 3.61e-01 | 100.0% | 83.7% |
| 1867253 | 705.1.1.1 ↗ | beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N › CVNH | 0.55 | 44.0 | 4.22e-01 | 91.0% | 91.7% |
| 4960403 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.55 | 33.0 | 3.36e-01 | 97.8% | 60.0% |
| 3435224 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.54 | 37.0 | 4.16e-01 | 71.9% | 98.5% |
| 3508119 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.54 | 38.0 | 3.42e-01 | 85.4% | 54.2% |
| 4436049 | 1190.1.1.1 ↗ | a+b two layers › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › CsgF | 0.53 | 38.0 | 3.67e-01 | 97.8% | 66.0% |
| 591 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.53 | 38.0 | 4.06e-01 | 96.6% | 88.2% |
| 3174396 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 41.0 | 2.70e-01 | 84.3% | 20.5% |
| 3479868 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 31.0 | 3.16e-01 | 98.9% | 57.8% |
| 3616263 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 36.0 | 3.57e-01 | 94.4% | 66.0% |
| 3582712 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 37.0 | 3.58e-01 | 98.9% | 64.8% |
| 3281720 | 223.1.1.36 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD | 0.51 | 39.0 | 3.37e-01 | 83.1% | 80.0% |
| 3697999 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 2.99e-01 | 88.8% | 31.0% |
| 5006669 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.51 | 39.0 | 3.73e-01 | 95.5% | 69.1% |
| 3517867 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.50 | 38.0 | 3.37e-01 | 85.4% | 54.6% |
| 3998221 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 36.0 | 3.14e-01 | 95.5% | 46.9% |
| 3875076 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.50 | 36.0 | 3.03e-01 | 85.4% | 45.5% |
| 3516794 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.50 | 38.0 | 3.23e-01 | 85.4% | 50.0% |
D3
high
residues 162-260
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 32.0 | 3.92e-01 | 94.9% | 75.4% |
| 2shpB03 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.63 | 46.0 | 3.32e-01 | 100.0% | 27.3% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 33.0 | 3.29e-01 | 100.0% | 52.0% |
| 3s95A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 29.0 | 3.10e-01 | 99.0% | 48.9% |
| 4aqcB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 31.0 | 3.16e-01 | 99.0% | 47.9% |
| 2jq5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 42.0 | 3.85e-01 | 71.7% | 78.9% |
| 3dxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 41.0 | 3.92e-01 | 89.9% | 62.4% |
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 36.0 | 3.62e-01 | 100.0% | 66.7% |
| 3a7fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 28.0 | 2.95e-01 | 74.7% | 51.6% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 40.0 | 3.50e-01 | 93.9% | 54.4% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 36.0 | 3.78e-01 | 74.7% | 78.3% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 35.0 | 2.88e-01 | 100.0% | 36.5% |
| 1h54B01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.51 | 45.0 | 3.32e-01 | 100.0% | 69.1% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4165306 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.68 | 40.0 | 3.97e-01 | 99.0% | 55.2% |
| 4972821 | 523.1.1.3 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › PF29994 | 0.67 | 57.0 | 5.35e-01 | 100.0% | 75.8% |
| 3664769 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.66 | 37.0 | 4.49e-01 | 100.0% | 85.7% |
| 4003687 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.63 | 47.0 | 3.27e-01 | 100.0% | 24.8% |
| 3996443 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.62 | 45.0 | 3.31e-01 | 99.0% | 29.2% |
| 4444078 | 243.3.1.5 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP | 0.62 | 49.0 | 4.68e-01 | 100.0% | 73.9% |
| 3496357 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.61 | 46.0 | 3.29e-01 | 100.0% | 27.4% |
| 3300056 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.60 | 35.0 | 3.73e-01 | 96.0% | 65.9% |
| 5082734 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 35.0 | 3.35e-01 | 100.0% | 48.3% |
| 3924294 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.60 | 46.0 | 3.28e-01 | 100.0% | 26.9% |
| 3238384 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.59 | 43.0 | 3.45e-01 | 100.0% | 39.0% |
| 3234110 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 43.0 | 3.42e-01 | 100.0% | 39.5% |
| 3223466 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 46.0 | 3.05e-01 | 100.0% | 20.8% |
| 3226799 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.57 | 42.0 | 2.96e-01 | 100.0% | 25.3% |
| 3297150 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 42.0 | 4.22e-01 | 89.9% | 86.0% |
| 3693957 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.52 | 42.0 | 3.39e-01 | 88.9% | 82.6% |
| 3470640 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 46.0 | 3.13e-01 | 100.0% | 29.9% |
| 3782891 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.50 | 43.0 | 3.00e-01 | 98.0% | 73.8% |
| 5028778 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.50 | 45.0 | 3.50e-01 | 100.0% | 73.5% |
D4
high
residues 263-346
Domain cluster:
rep: MT939492.1__QNR51825.1__Xoosp14_134__00134__D70-152
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qfkA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.66 | 39.0 | 3.50e-01 | 91.7% | 42.6% |
| 1dpeA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 38.0 | 3.42e-01 | 92.9% | 43.7% |
| 1uqwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 37.0 | 3.35e-01 | 92.9% | 43.8% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 51.0 | 4.17e-01 | 92.9% | 62.7% |
| 7oodf01 | 3.10.430.100 | Alpha Beta › Roll › Ribosomal Protein L9; domain 2 › Ribosomal protein L9, C-terminal domain | 0.61 | 49.0 | 5.08e-01 | 91.7% | 100.0% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.61 | 44.0 | 3.73e-01 | 92.9% | 45.7% |
| 2awnC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 34.0 | 3.93e-01 | 83.3% | 77.6% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 50.0 | 4.38e-01 | 95.2% | 82.2% |
| 2wolA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 49.0 | 3.33e-01 | 92.9% | 70.2% |
| 2jzkA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 43.0 | 4.06e-01 | 79.8% | 90.3% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.58 | 37.0 | 3.43e-01 | 76.2% | 49.1% |
| 3zs6A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 48.0 | 3.83e-01 | 91.7% | 55.7% |
| 6eotD01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.57 | 40.0 | 2.48e-01 | 73.8% | 20.5% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 47.0 | 3.38e-01 | 91.7% | 92.6% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 41.0 | 2.99e-01 | 77.4% | 39.0% |
| 5mj3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 45.0 | 4.45e-01 | 86.9% | 100.0% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.56 | 40.0 | 3.81e-01 | 78.6% | 62.1% |
| 7vcoA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.56 | 39.0 | 3.28e-01 | 77.4% | 41.3% |
| 1jc4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 39.0 | 3.35e-01 | 95.2% | 43.4% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 40.0 | 2.70e-01 | 76.2% | 97.1% |
| 2fgtA03 | 3.30.310.160 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 | 0.55 | 45.0 | 3.90e-01 | 90.5% | 59.3% |
| 4d8oA03 | 2.60.40.2660 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 3.74e-01 | 83.3% | 92.1% |
| 6bnzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 39.0 | 3.35e-01 | 94.0% | 45.0% |
| 1qwyA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.55 | 44.0 | 3.54e-01 | 88.1% | 86.0% |
| 3pijA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.55 | 39.0 | 3.32e-01 | 78.6% | 43.0% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 41.0 | 3.61e-01 | 79.8% | 79.0% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.76e-01 | 92.9% | 64.7% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.54 | 38.0 | 2.58e-01 | 75.0% | 18.3% |
| 4oevA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 45.0 | 3.69e-01 | 91.7% | 51.0% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 29.0 | 3.26e-01 | 86.9% | 67.2% |
| 3ostA00 | 3.30.310.220 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Fungal kinase associated-1 domain | 0.54 | 41.0 | 3.66e-01 | 90.5% | 57.1% |
| 2yzyA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 37.0 | 2.99e-01 | 75.0% | 36.8% |
| 1i99I02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 33.0 | 2.96e-01 | 82.1% | 43.6% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 45.0 | 3.23e-01 | 92.9% | 93.4% |
| 2nwvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.53 | 37.0 | 3.46e-01 | 77.4% | 56.2% |
| 4ncdA02 | 2.60.40.3970 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.24e-01 | 89.3% | 100.0% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.52 | 36.0 | 3.43e-01 | 81.0% | 58.7% |
| 2dbjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 4.17e-01 | 98.8% | 92.7% |
| 1yt5A02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.52 | 36.0 | 3.28e-01 | 75.0% | 99.2% |
| 1w4bA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 3.20e-01 | 92.9% | 86.3% |
| 3we5A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 35.0 | 3.02e-01 | 70.2% | 70.9% |
| 4fa8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.41e-01 | 94.0% | 59.6% |
| 6iw6B01 | 1.10.1410.10 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.51 | 37.0 | 2.80e-01 | 77.4% | 47.7% |
| 2pkdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.77e-01 | 86.9% | 99.1% |
| 5cyxA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 41.0 | 4.17e-01 | 88.1% | 100.0% |
| 2q1fA04 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.50 | 35.0 | 3.01e-01 | 72.6% | 94.4% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 40.0 | 3.28e-01 | 90.5% | 58.7% |
| 3mj6A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.62e-01 | 85.7% | 99.1% |
| 2rovA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 40.0 | 3.68e-01 | 90.5% | 78.6% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4197431 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 52.0 | 5.55e-01 | 85.7% | 100.0% |
| 5012515 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.63 | 46.0 | 4.31e-01 | 91.7% | 62.9% |
| 5052436 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.62 | 42.0 | 4.30e-01 | 92.9% | 72.5% |
| 3960959 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.61 | 40.0 | 4.51e-01 | 90.5% | 93.3% |
| 141164 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.61 | 51.0 | 4.22e-01 | 92.9% | 65.1% |
| 3989366 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.60 | 40.0 | 4.18e-01 | 94.0% | 77.3% |
| 4024503 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 42.0 | 4.35e-01 | 77.4% | 77.5% |
| 3928295 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.59 | 45.0 | 3.47e-01 | 82.1% | 44.5% |
| None | — | 0.59 | 42.0 | 2.83e-01 | 75.0% | 26.5% | |
| 327025 | 6048.1.1.1 ↗ | a+b two layers › DUF960-like › DUF960-like › DUF960-like › DUF960 | 0.58 | 42.0 | 3.90e-01 | 78.6% | 60.4% |
| 3727780 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.58 | 42.0 | 2.84e-01 | 76.2% | 25.8% |
| 4029963 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.58 | 37.0 | 3.32e-01 | 83.3% | 47.0% |
| 4934001 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.58 | 44.0 | 3.82e-01 | 79.8% | 78.4% |
| 3599890 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.58 | 38.0 | 3.19e-01 | 77.4% | 38.6% |
| 5052550 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.57 | 42.0 | 3.70e-01 | 77.4% | 78.4% |
| 3784283 | 319.1.1.6 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › Pih1_fungal_CS | 0.57 | 42.0 | 4.25e-01 | 94.0% | 78.3% |
| 1567474 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.57 | 46.0 | 3.26e-01 | 91.7% | 28.3% |
| 3845291 | 220.1.1.119 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th | 0.57 | 40.0 | 3.00e-01 | 75.0% | 57.9% |
| 4029709 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 40.0 | 3.47e-01 | 78.6% | 48.8% |
| 3990213 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.57 | 43.0 | 4.06e-01 | 88.1% | 68.0% |
| 3929482 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.57 | 41.0 | 3.42e-01 | 78.6% | 68.1% |
| 3937835 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.56 | 42.0 | 3.80e-01 | 88.1% | 56.7% |
| 4960002 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 43.0 | 4.21e-01 | 84.5% | 75.6% |
| 4932472 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.56 | 39.0 | 3.83e-01 | 90.5% | 65.3% |
| 5005811 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.56 | 44.0 | 4.51e-01 | 83.3% | 96.2% |
| 4981041 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.56 | 32.0 | 3.88e-01 | 92.9% | 92.0% |
| 4870150 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.56 | 41.0 | 3.57e-01 | 79.8% | 73.1% |
| 4946576 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 49.0 | 3.85e-01 | 97.6% | 78.7% |
| 3782947 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.55 | 43.0 | 3.89e-01 | 94.0% | 60.0% |
| 168173 | 4276.1.1.1 ↗ | a+b two layers › XisI-like › XisI-like › XisI-like › XisI | 0.55 | 37.0 | 3.42e-01 | 81.0% | 53.2% |
| 3697999 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 42.0 | 3.07e-01 | 84.5% | 32.9% |
| 3193676 | 5.1.5.222 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Med16_N | 0.55 | 37.0 | 2.34e-01 | 71.4% | 24.0% |
| 4937869 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.54 | 43.0 | 4.34e-01 | 88.1% | 92.9% |
| 4106050 | 316.1.1.6 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Mab-21 | 0.54 | 47.0 | 3.41e-01 | 96.4% | 83.3% |
| 3401931 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.54 | 42.0 | 4.04e-01 | 90.5% | 73.7% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.54 | 37.0 | 3.96e-01 | 94.0% | 84.3% |
| 3712993 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 36.0 | 3.77e-01 | 79.8% | 77.3% |
| 4142330 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.54 | 39.0 | 2.98e-01 | 79.8% | 32.8% |
| 3796107 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.54 | 38.0 | 3.76e-01 | 73.8% | 80.0% |
| 4081797 | 3860.1.1.158 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE | 0.53 | 41.0 | 3.55e-01 | 94.0% | 49.7% |
| 4998404 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 35.0 | 4.16e-01 | 92.9% | 96.7% |
| 6662 | 4276.1.1.1 ↗ | a+b two layers › XisI-like › XisI-like › XisI-like › XisI | 0.53 | 37.0 | 3.46e-01 | 77.4% | 56.2% |
| 4037081 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.53 | 46.0 | 3.63e-01 | 97.6% | 70.0% |
| 3527109 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.25e-01 | 92.9% | 97.9% |
| 3922536 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 42.0 | 3.52e-01 | 90.5% | 49.0% |
| 3720771 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 45.0 | 3.66e-01 | 94.0% | 56.1% |
| 3632843 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 45.0 | 3.68e-01 | 95.2% | 69.7% |
| 5035450 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 35.0 | 3.36e-01 | 88.1% | 61.1% |
| 3853656 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.51 | 43.0 | 4.17e-01 | 92.9% | 97.9% |
| 3613372 | 3409.1.1.1 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 | 0.51 | 34.0 | 2.27e-01 | 78.6% | 16.1% |
| 4250963 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.51 | 40.0 | 3.10e-01 | 91.7% | 36.0% |
| 5049530 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.50 | 44.0 | 4.30e-01 | 97.6% | 94.4% |
| 3199325 | 241.1.1.11 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Med14 | 0.50 | 35.0 | 2.84e-01 | 73.8% | 75.6% |
| 3616263 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 42.0 | 3.98e-01 | 91.7% | 92.0% |
| 4838661 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 35.0 | 3.27e-01 | 73.8% | 62.4% |
| 3937910 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 35.0 | 3.54e-01 | 90.5% | 72.9% |
| 3248749 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.50 | 36.0 | 3.40e-01 | 78.6% | 86.4% |
| 4032285 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.50 | 42.0 | 3.40e-01 | 92.9% | 60.6% |
| 5011151 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 43.0 | 3.53e-01 | 96.4% | 53.1% |