←Back to structures

NC_048016.1__YP_009806686.1__HOT70_gp099__00194

Bact-Vir

NC_048016.1__YP_009806686.1__HOT70_gp099__00194

Identity

Accession:
NC_048016 ↗
Kingdom:
phage

Quality

61.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Wellingtonvirus› Erwinia_phage_Wellington

TaxID: 2267653

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 41-133
PDB
Domain cluster: rep: KX397365.1__ANZ48394.1__CAITLIN_99__00092__D45-129
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 60.0 4.09e-01 100.0% 44.2%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 52.0 3.60e-01 100.0% 24.8%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.65 38.0 3.77e-01 98.9% 54.5%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 56.0 3.60e-01 100.0% 31.2%
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 56.0 3.73e-01 100.0% 45.8%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 56.0 3.93e-01 100.0% 36.3%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 55.0 3.90e-01 100.0% 40.0%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 53.0 3.61e-01 100.0% 36.3%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 53.0 3.80e-01 100.0% 43.7%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 52.0 3.69e-01 100.0% 35.1%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 3.44e-01 83.9% 84.8%
6m90A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 50.0 3.51e-01 96.8% 38.3%
2cn2A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 49.0 3.28e-01 100.0% 26.6%
2dslA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 48.0 4.53e-01 100.0% 94.8%
5tkyA04 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.55 48.0 4.47e-01 97.8% 84.5%
1zvfB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 39.0 3.23e-01 75.3% 72.6%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.53 41.0 3.63e-01 83.9% 92.3%
4ybvA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 46.0 4.27e-01 100.0% 94.2%
3wdhA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 39.0 4.12e-01 100.0% 86.9%
1ilvA00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.52 42.0 3.22e-01 91.4% 90.2%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.51 38.0 3.52e-01 78.5% 68.3%
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.51 41.0 3.16e-01 92.5% 90.7%
5jenA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.51 39.0 3.76e-01 84.9% 91.9%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3445416 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.71 64.0 4.25e-01 100.0% 39.7%
3437488 5.1.3.159 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 0.69 62.0 4.35e-01 96.8% 48.6%
3421545 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.69 63.0 4.13e-01 100.0% 37.9%
3466402 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.68 63.0 4.59e-01 100.0% 52.3%
3801954 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.68 60.0 4.09e-01 100.0% 34.9%
3815611 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.67 59.0 4.10e-01 96.8% 42.7%
3802832 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.67 61.0 4.15e-01 100.0% 38.2%
None — 0.66 55.0 3.26e-01 100.0% 12.4%
3463640 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 60.0 4.02e-01 100.0% 26.9%
3819081 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.66 58.0 4.06e-01 97.8% 39.0%
3250522 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 58.0 3.42e-01 98.9% 19.9%
3422639 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.65 58.0 3.85e-01 98.9% 37.1%
3573300 5.1.3.26 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.65 58.0 3.90e-01 100.0% 30.3%
3430637 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.65 59.0 4.03e-01 100.0% 32.3%
3389626 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.65 37.0 4.16e-01 84.9% 72.0%
3949933 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.63 57.0 3.80e-01 100.0% 38.1%
4192062 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.63 57.0 3.24e-01 100.0% 13.3%
4030359 5.1.3.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.63 55.0 3.63e-01 100.0% 36.9%
3197370 5.1.3.23 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.62 54.0 3.72e-01 98.9% 34.7%
3938509 5.1.4.304 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.62 56.0 3.83e-01 100.0% 32.6%
3936285 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 54.0 3.94e-01 100.0% 39.6%
3715739 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.62 53.0 3.51e-01 100.0% 27.0%
3991341 5.1.4.304 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.61 55.0 3.32e-01 100.0% 16.7%
5022763 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 55.0 3.77e-01 100.0% 36.0%
3720627 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 51.0 3.40e-01 100.0% 21.7%
None — 0.61 50.0 2.98e-01 100.0% 12.2%
3268410 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.61 53.0 3.59e-01 100.0% 42.4%
3981129 7089.1.1.5 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › PF30110 0.60 45.0 4.73e-01 94.6% 87.1%
3510076 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.60 51.0 3.52e-01 96.8% 40.9%
3197280 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 53.0 3.59e-01 100.0% 38.9%
None — 0.60 52.0 3.71e-01 100.0% 37.0%
4970213 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 54.0 3.65e-01 100.0% 33.4%
3177446 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.59 52.0 3.53e-01 100.0% 42.2%
3979569 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 44.0 4.20e-01 79.6% 91.8%
3419220 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 51.0 3.55e-01 96.8% 37.5%
3603190 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 53.0 3.18e-01 100.0% 16.6%
3565027 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.59 51.0 3.48e-01 100.0% 26.2%
3232370 5.1.3.115 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_ATRN-LZTR1 0.58 51.0 3.49e-01 100.0% 33.6%
2067889 5.1.3.32 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_4 0.58 50.0 3.36e-01 98.9% 41.3%
3425464 5.1.3.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.58 50.0 3.43e-01 100.0% 44.0%
3279517 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.57 50.0 3.04e-01 100.0% 14.3%
3789395 5.1.4.348 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st 0.57 51.0 3.48e-01 100.0% 32.8%
3695617 5.1.3.137 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 0.57 50.0 3.44e-01 100.0% 39.7%
3468658 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 48.0 3.45e-01 96.8% 44.3%
3308036 5.1.3.235 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.56 49.0 3.36e-01 100.0% 37.8%
3368618 5.1.3.151 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.56 49.0 3.35e-01 100.0% 37.8%
3822993 5.1.3.160 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.56 48.0 3.29e-01 100.0% 42.4%
3779299 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.55 49.0 2.95e-01 100.0% 20.4%
4106397 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 35.0 3.86e-01 87.1% 81.3%
5043415 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 41.0 3.85e-01 86.0% 93.3%
3633368 5.1.8.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.53 46.0 4.13e-01 100.0% 78.5%
3791021 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.52 46.0 3.23e-01 100.0% 30.2%