←Back to structures
NC_048016.1__YP_009806760.1__HOT70_gp025__00268
Bact-VirNC_048016.1__YP_009806760.1__HOT70_gp025__00268
Identity
- Accession:
- NC_048016 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Wellingtonvirus›
Erwinia_phage_Wellington
TaxID: 2267653
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-162
Domain cluster:
rep: OP991903.1__WBF04704.1__X__00030__D15-133
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1luiA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 29.0 | 3.41e-01 | 78.3% | 63.0% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.60 | 21.0 | 3.53e-01 | 72.0% | 88.1% |
| 1wp1B01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.56 | 41.0 | 3.17e-01 | 75.8% | 96.5% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 26.0 | 2.51e-01 | 82.0% | 37.2% |
| 1cgtA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 27.0 | 3.31e-01 | 82.6% | 73.4% |
| 3devA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.55 | 33.0 | 3.86e-01 | 81.4% | 83.6% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.54 | 34.0 | 3.90e-01 | 82.6% | 85.8% |
| 3g98A00 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.54 | 31.0 | 3.76e-01 | 74.5% | 84.7% |
| 2zvfA02 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.51 | 28.0 | 3.41e-01 | 73.9% | 81.1% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3731818 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.61 | 41.0 | 2.97e-01 | 79.5% | 25.9% |
| 3728722 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 34.0 | 2.94e-01 | 78.3% | 36.3% |
| 4033357 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.57 | 36.0 | 4.12e-01 | 85.7% | 86.4% |
| 3729048 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 38.0 | 3.67e-01 | 83.2% | 61.1% |
| 4422472 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.56 | 35.0 | 4.04e-01 | 88.8% | 84.9% |
| 185162 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 35.0 | 3.98e-01 | 85.7% | 84.3% |
| 4997576 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.55 | 29.0 | 3.35e-01 | 88.2% | 70.0% |
| 4971696 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.55 | 35.0 | 3.82e-01 | 80.7% | 76.7% |
| 3640675 | 2008.1.1.98 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Pkinase_fungal | 0.55 | 36.0 | 2.83e-01 | 82.0% | 32.8% |
| 4035949 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 36.0 | 4.08e-01 | 81.4% | 86.3% |
| 5042090 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 35.0 | 3.84e-01 | 87.6% | 77.0% |
| 4096132 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 33.0 | 3.89e-01 | 81.4% | 85.2% |
| 5068670 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 33.0 | 3.98e-01 | 80.1% | 89.9% |
| 4669968 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.54 | 33.0 | 3.89e-01 | 75.8% | 85.8% |
| 5066005 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 33.0 | 3.74e-01 | 80.1% | 79.2% |
| 4147512 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 35.0 | 4.03e-01 | 83.2% | 89.2% |
| 4130263 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 36.0 | 3.95e-01 | 85.7% | 83.8% |
| 4566002 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 35.0 | 4.00e-01 | 79.5% | 86.3% |
| 4931371 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 34.0 | 3.75e-01 | 84.5% | 79.2% |
| 5029885 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 34.0 | 3.91e-01 | 79.5% | 88.7% |
| 4066113 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 35.0 | 3.98e-01 | 83.2% | 87.8% |
| 4988258 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.53 | 32.0 | 3.70e-01 | 78.3% | 81.7% |
| 3422634 | 10.12.1.73 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DIOX_N | 0.53 | 38.0 | 3.15e-01 | 72.7% | 96.0% |
| 4155143 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 36.0 | 4.01e-01 | 82.0% | 86.2% |
| 5021150 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.53 | 31.0 | 3.82e-01 | 79.5% | 93.0% |
| 4035829 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 36.0 | 3.96e-01 | 84.5% | 86.2% |
| 5079657 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.52 | 32.0 | 3.71e-01 | 81.4% | 84.3% |
| 4628908 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 36.0 | 3.96e-01 | 82.6% | 86.9% |
| 4294658 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 36.0 | 3.96e-01 | 83.2% | 86.9% |
| 5070287 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 33.0 | 3.73e-01 | 83.2% | 83.2% |
| 4076034 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 35.0 | 3.85e-01 | 83.2% | 84.6% |
| 4159959 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 40.0 | 4.16e-01 | 88.8% | 89.7% |
| 5000284 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.51 | 32.0 | 3.74e-01 | 80.7% | 87.8% |
| 5082529 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 34.0 | 3.66e-01 | 86.3% | 80.0% |
| 4041870 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.51 | 33.0 | 3.77e-01 | 78.3% | 87.5% |
| 4013103 | 2008.1.1.99 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 | 0.50 | 39.0 | 3.52e-01 | 83.2% | 69.4% |
| 3413176 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 39.0 | 2.96e-01 | 80.7% | 42.1% |
| 4350982 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.50 | 34.0 | 3.86e-01 | 84.5% | 89.6% |
| 4985405 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.50 | 32.0 | 3.65e-01 | 79.5% | 83.2% |
| 4298327 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.50 | 33.0 | 3.76e-01 | 81.4% | 87.1% |
| 4995246 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.50 | 32.0 | 3.61e-01 | 81.4% | 82.9% |
| 5048880 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.50 | 31.0 | 3.59e-01 | 82.0% | 86.1% |