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NC_048018.1__YP_009806932.1__HOT72_gp084__00084
Bact-VirNC_048018.1__YP_009806932.1__HOT72_gp084__00084
Identity
- Accession:
- NC_048018 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Taxonomy
TaxID: 2250319
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-63
Domain cluster:
rep: MN175604.1__QDP43684.1__SEA_PHORBESPHLOWER_56__00056__D6-62
D2
high
residues 75-141
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.66 | 56.0 | 4.22e-01 | 100.0% | 82.9% |
| 3kd4A03 | 2.60.120.1130 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 48.0 | 3.85e-01 | 82.1% | 43.8% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.63 | 50.0 | 4.01e-01 | 85.1% | 46.9% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 45.0 | 3.59e-01 | 98.5% | 40.5% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 48.0 | 3.87e-01 | 92.5% | 45.7% |
| 3mz1B01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 53.0 | 4.52e-01 | 98.5% | 90.6% |
| 1j3wC00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 48.0 | 3.93e-01 | 92.5% | 94.0% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 45.0 | 3.63e-01 | 83.6% | 82.2% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 49.0 | 3.79e-01 | 97.0% | 39.6% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 46.0 | 3.12e-01 | 86.6% | 95.7% |
| 3ip3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 42.0 | 2.99e-01 | 76.1% | 68.5% |
| 7vljA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.58 | 46.0 | 4.22e-01 | 89.6% | 83.9% |
| 2l72A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 48.0 | 4.11e-01 | 100.0% | 77.1% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 42.0 | 3.36e-01 | 92.5% | 39.8% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.57 | 48.0 | 4.04e-01 | 97.0% | 98.3% |
| 7r8iA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 40.0 | 2.80e-01 | 74.6% | 23.5% |
| 2htaA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 50.0 | 3.23e-01 | 100.0% | 34.7% |
| 3agkA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.55 | 42.0 | 3.42e-01 | 80.6% | 93.5% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 40.0 | 3.26e-01 | 76.1% | 42.7% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 43.0 | 3.72e-01 | 88.1% | 53.7% |
| 7essA01 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.55 | 41.0 | 3.28e-01 | 79.1% | 96.2% |
| 2fsrA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 45.0 | 3.50e-01 | 100.0% | 70.8% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 44.0 | 2.87e-01 | 89.6% | 82.8% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 46.0 | 3.56e-01 | 94.0% | 95.2% |
| 1oypA01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.54 | 46.0 | 3.31e-01 | 100.0% | 49.1% |
| 2nn6E00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.54 | 46.0 | 3.13e-01 | 100.0% | 41.1% |
| 2qzuA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 45.0 | 4.23e-01 | 100.0% | 97.6% |
| 2cxaA02 | 3.40.630.70 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal domain | 0.52 | 44.0 | 3.42e-01 | 100.0% | 73.2% |
| 3s95A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.27e-01 | 71.6% | 54.5% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 39.0 | 3.48e-01 | 82.1% | 56.7% |
| 6aikB00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.51 | 41.0 | 2.67e-01 | 89.6% | 39.9% |
| 1x99A00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.51 | 42.0 | 3.44e-01 | 100.0% | 80.7% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 2.78e-01 | 100.0% | 38.4% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3688914 | 283.1.1.4 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › ThrE | 0.74 | 41.0 | 3.12e-01 | 76.1% | 26.4% |
| 5049758 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.66 | 51.0 | 3.98e-01 | 85.1% | 86.9% |
| 3415072 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.65 | 46.0 | 3.65e-01 | 82.1% | 36.4% |
| 4976810 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 50.0 | 4.02e-01 | 85.1% | 93.3% |
| 3173631 | 883.1.1.22 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26547 | 0.62 | 44.0 | 3.11e-01 | 74.6% | 58.1% |
| 4478350 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.60 | 46.0 | 3.83e-01 | 83.6% | 96.7% |
| 5047489 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.59 | 48.0 | 3.45e-01 | 95.5% | 29.8% |
| 4029094 | 3257.1.1.0 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain | 0.58 | 47.0 | 3.47e-01 | 92.5% | 60.0% |
| 5007927 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 48.0 | 3.89e-01 | 94.0% | 88.0% |
| 3882464 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 40.0 | 3.85e-01 | 71.6% | 81.3% |
| 5072644 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.57 | 43.0 | 3.46e-01 | 80.6% | 87.7% |
| 3226306 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 50.0 | 4.24e-01 | 100.0% | 93.9% |
| 3592221 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 38.0 | 3.23e-01 | 70.1% | 88.1% |
| 3539661 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.57 | 41.0 | 3.03e-01 | 80.6% | 52.4% |
| 3283568 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.57 | 49.0 | 4.06e-01 | 98.5% | 99.2% |
| 5029530 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.57 | 47.0 | 3.45e-01 | 92.5% | 76.2% |
| 4884064 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.56 | 48.0 | 4.05e-01 | 100.0% | 100.0% |
| 3295834 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.56 | 46.0 | 3.48e-01 | 100.0% | 63.6% |
| 3725186 | 883.1.1.7 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › MMM1 | 0.55 | 48.0 | 3.42e-01 | 100.0% | 74.8% |
| 4371182 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.55 | 45.0 | 3.19e-01 | 95.5% | 75.7% |
| 3688781 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.55 | 48.0 | 3.44e-01 | 100.0% | 76.6% |
| 3731204 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 46.0 | 2.91e-01 | 98.5% | 45.3% |
| 4012809 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.54 | 45.0 | 3.33e-01 | 100.0% | 71.4% |
| 3396674 | 883.1.1.7 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › MMM1 | 0.54 | 47.0 | 3.37e-01 | 100.0% | 75.7% |
| 3400015 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.54 | 43.0 | 3.56e-01 | 91.0% | 94.6% |
| 3205292 | 883.1.1.20 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_MUG190-like | 0.54 | 46.0 | 3.24e-01 | 100.0% | 69.4% |
| 3970566 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 45.0 | 3.47e-01 | 100.0% | 88.4% |
| 3775744 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.53 | 38.0 | 3.16e-01 | 76.1% | 75.8% |
| 4972031 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 39.0 | 3.29e-01 | 85.1% | 100.0% |
| 3280079 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 38.0 | 3.25e-01 | 82.1% | 85.4% |
| 3523579 | 883.1.1.10 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_C2CD2L | 0.52 | 44.0 | 3.22e-01 | 100.0% | 58.1% |
| 4525941 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.51 | 40.0 | 2.87e-01 | 89.6% | 82.2% |
| 3740081 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.51 | 44.0 | 3.80e-01 | 98.5% | 98.2% |
| 5059423 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.50 | 40.0 | 3.65e-01 | 86.6% | 76.7% |
| 3743296 | 883.1.1.20 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_MUG190-like | 0.50 | 38.0 | 2.72e-01 | 82.1% | 80.5% |