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NC_048022.1__YP_009807293.1__HOT76_gp14__00014
Bact-VirNC_048022.1__YP_009807293.1__HOT76_gp14__00014
Identity
- Accession:
- NC_048022 ↗
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Taxonomy
TaxID: 2283015
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 19-102
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.67 | 52.0 | 4.56e-01 | 83.3% | 76.0% |
| 3c24A02 | 1.10.3640.10 | Mainly Alpha › Orthogonal Bundle › putative oxidoreductase fold › Semialdehyde dehydrogenase-like, C-terminal | 0.67 | 53.0 | 4.99e-01 | 91.7% | 72.0% |
| 3bqkA02 | 1.20.1310.20 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain | 0.62 | 46.0 | 3.77e-01 | 78.6% | 48.4% |
| 3rlfG01 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.56 | 47.0 | 3.33e-01 | 92.9% | 32.6% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.52 | 41.0 | 3.07e-01 | 85.7% | 69.1% |
| 1dmuA00 | 3.40.600.20 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Restriction endonuclease BglI | 0.52 | 41.0 | 2.92e-01 | 89.3% | 72.2% |
| 4b6iA00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 39.0 | 3.74e-01 | 86.9% | 68.0% |
| 4ed9A02 | 3.30.1540.10 | Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › formyl-coa transferase, domain 3 | 0.51 | 35.0 | 3.44e-01 | 71.4% | 92.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971928 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.72 | 49.0 | 5.21e-01 | 70.2% | 85.3% |
| 3063543 | 109.23.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 | 0.70 | 48.0 | 4.13e-01 | 78.6% | 45.8% |
| 3512845 | 109.4.1.514 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps54 | 0.66 | 49.0 | 3.15e-01 | 79.8% | 16.8% |
| 4958384 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.65 | 48.0 | 4.76e-01 | 77.4% | 92.2% |
| 3315324 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.62 | 40.0 | 3.53e-01 | 79.8% | 45.0% |
| 4964033 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.61 | 50.0 | 3.84e-01 | 92.9% | 76.6% |
| 3225714 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.53 | 41.0 | 3.41e-01 | 83.3% | 81.9% |
| 4394019 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.52 | 37.0 | 3.33e-01 | 78.6% | 90.8% |
| 4931792 | 306.3.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › DEAD_assoc | 0.51 | 38.0 | 2.96e-01 | 79.8% | 79.0% |
| 4310744 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.50 | 36.0 | 2.99e-01 | 77.4% | 40.6% |