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NC_048022.1__YP_009807300.1__HOT76_gp21__00021
Bact-VirNC_048022.1__YP_009807300.1__HOT76_gp21__00021
Identity
- Accession:
- NC_048022 ↗
- Kingdom:
- phage
Quality
88.5
mean pLDDT
Taxonomy
TaxID: 2283015
Cluster
View cluster (74 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-37_60-160
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.66 | 54.0 | 4.33e-01 | 85.7% | 61.2% |
| 2wzpP01 | 2.40.30.210 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 50.0 | 5.46e-01 | 86.5% | 100.0% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 49.0 | 4.81e-01 | 94.7% | 74.8% |
| 2hlcA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 39.0 | 4.37e-01 | 86.5% | 79.8% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.62 | 52.0 | 5.04e-01 | 90.2% | 91.8% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.62 | 52.0 | 4.92e-01 | 90.2% | 84.0% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.61 | 51.0 | 4.83e-01 | 90.2% | 85.6% |
| 3ba3B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 51.0 | 5.01e-01 | 90.2% | 86.0% |
| 3fn5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.58 | 51.0 | 4.78e-01 | 96.2% | 93.3% |
| 2r4fA02 | 3.90.770.10 | Alpha Beta › Alpha-Beta Complex › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 | 0.58 | 49.0 | 4.25e-01 | 91.7% | 75.2% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 32.0 | 3.90e-01 | 72.2% | 82.0% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 47.0 | 5.00e-01 | 91.0% | 99.2% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.57 | 41.0 | 4.49e-01 | 86.5% | 92.7% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 47.0 | 4.67e-01 | 89.5% | 95.6% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 29.0 | 3.32e-01 | 100.0% | 68.4% |
| 2di8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 33.0 | 3.90e-01 | 80.5% | 87.2% |
| 3rghA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 34.0 | 3.88e-01 | 79.7% | 87.5% |
| 1p97A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 39.0 | 4.16e-01 | 75.9% | 98.2% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.77e-01 | 77.4% | 90.0% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 33.0 | 3.82e-01 | 88.0% | 93.3% |
| 2khdA00 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 30.0 | 3.35e-01 | 72.2% | 72.2% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.74 | 67.0 | 6.21e-01 | 97.0% | 89.2% |
| 4952909 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 47.0 | 5.15e-01 | 91.0% | 89.5% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 58.0 | 5.86e-01 | 91.0% | 100.0% |
| 4954552 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.67 | 62.0 | 5.80e-01 | 100.0% | 90.6% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 51.0 | 5.59e-01 | 90.2% | 99.1% |
| 3265120 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.65 | 55.0 | 5.07e-01 | 91.7% | 85.1% |
| 3264744 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.65 | 55.0 | 5.05e-01 | 91.7% | 85.1% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 49.0 | 5.41e-01 | 83.5% | 100.0% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.65 | 54.0 | 5.25e-01 | 90.2% | 89.9% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.62 | 47.0 | 4.76e-01 | 79.7% | 100.0% |
| 80 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.62 | 52.0 | 4.89e-01 | 90.2% | 84.4% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 50.0 | 5.14e-01 | 88.7% | 99.2% |
| 3636995 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.59 | 49.0 | 4.18e-01 | 89.5% | 78.1% |
| 4436687 | 304.31.2.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › Substrate-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.58 | 49.0 | 3.74e-01 | 91.7% | 50.6% |
| 3977123 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.57 | 52.0 | 4.90e-01 | 100.0% | 93.1% |
| 3786062 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.56 | 46.0 | 4.26e-01 | 88.7% | 77.9% |
| 4022169 | 11.1.1.581 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Tag1_C | 0.55 | 41.0 | 3.86e-01 | 78.2% | 93.1% |
| 3437290 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.54 | 48.0 | 4.09e-01 | 97.0% | 71.2% |
| 4929968 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.54 | 41.0 | 4.00e-01 | 78.9% | 75.9% |
| 3275824 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 35.0 | 3.99e-01 | 82.7% | 89.0% |
| 4979694 | 4052.1.1.1 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA_dh_M | 0.53 | 41.0 | 4.33e-01 | 83.5% | 100.0% |
| 3926912 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.51 | 43.0 | 4.05e-01 | 90.2% | 97.5% |
| 3256689 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 30.0 | 3.65e-01 | 79.7% | 90.6% |
| 3510502 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 35.0 | 3.94e-01 | 100.0% | 97.9% |