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NC_048027.1__YP_009807652.1__HOT81_gp100__00100

Bact-Vir

Identity

Accession:: NC_048027 ↗
Kingdom:: phage

Quality

91.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ronaldovirus› Gordonia_phage_Fryberger

TaxID: 2250392

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-102

PDB

Domain cluster: rep: MK524501.1__QBP33300.1__SEA_BRUTONGASTER_85__00080__D7-82

D2 high residues 109-172

PDB

Domain cluster: representative

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1z23A00	1.20.120.830	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain	0.67	55.0	4.17e-01	93.8%	92.0%
2pbeA02	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.67	53.0	4.28e-01	87.5%	74.6%
7zxkC01	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.65	52.0	3.93e-01	87.5%	98.7%
4nooB00	1.10.8.1160	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.58	40.0	3.56e-01	71.9%	76.8%
3nvoB02	1.20.58.340	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region	0.57	42.0	3.45e-01	87.5%	44.0%
4ewcA03	1.20.120.1660	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.56	45.0	4.40e-01	95.3%	98.7%
3rklA00	6.10.140.1640	Special › Helix non-globular › Helix Hairpins ›	0.56	41.0	3.83e-01	87.5%	62.5%
3whjA00	6.10.140.1710	Special › Helix non-globular › Helix Hairpins ›	0.55	43.0	3.53e-01	82.8%	52.3%
1yo7A00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.55	45.0	3.59e-01	87.5%	46.7%
3rkgA02	1.20.58.340	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region	0.54	41.0	3.03e-01	81.2%	45.7%
1huxA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.53	42.0	3.31e-01	87.5%	68.6%
3iieB03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.52	42.0	3.83e-01	89.1%	68.2%
1uurA01	1.20.58.240	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1	0.51	33.0	2.82e-01	82.8%	38.2%
2h21A02	3.90.1420.10	Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain	0.51	42.0	3.21e-01	95.3%	57.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3483523	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.58	50.0	3.86e-01	96.9%	68.3%
5069771	304.28.1.0 ↗	a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain	0.57	44.0	3.59e-01	87.5%	57.0%
3468013	3291.1.1.0 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related	0.56	37.0	3.25e-01	92.2%	44.0%
3503238	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.55	45.0	3.25e-01	87.5%	48.2%
3676480	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.51	42.0	3.71e-01	87.5%	80.0%