YP_009808114.1

Arc-Vir

NC_048037__YP_009808114.1__HOT91-gp04__00004

Identity

Accession:: NC_048037 ↗
Protein ID:: YP_009808114.1 ↗
Kingdom:: archaea

Quality

93.2 mean pLDDT

Taxonomy

Zilligvirae› Taleaviricota› Tokiviricetes› Ligamenvirales› Lipothrixviridae› Alphalipothrixvirus› Sulfolobus_filamentous_virus_1

TaxID: 2304198

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-131

PDB

Domain cluster: rep: IMGVR_UViG_2504557009_000001-2504557009-2504595713__D4-113

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3n8bA00	3.10.450.700	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.66	38.0	4.64e-01	79.8%	92.0%
3ci0K01	3.30.1300.30	Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like	0.63	39.0	4.29e-01	99.2%	75.0%
2ww8A01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	43.0	4.67e-01	77.4%	98.1%
3bwsA01	2.60.40.3070	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.57	37.0	4.38e-01	75.8%	97.6%
2xtsA02	2.60.40.650	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.54	44.0	4.37e-01	88.7%	83.1%
6yfiB01	3.30.380.10	Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein	0.53	38.0	3.72e-01	74.2%	85.9%
3njfA00	2.60.40.420	Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins	0.53	33.0	3.44e-01	72.6%	67.0%
2r5rA00	3.10.270.10	Alpha Beta › Roll › Urate Oxidase › Urate Oxidase;	0.52	39.0	3.19e-01	80.6%	85.8%
2vn4A02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	38.0	3.92e-01	76.6%	90.4%
3g7gH00	2.40.160.20	Mainly Beta › Beta Barrel › Porin ›	0.50	38.0	3.52e-01	77.4%	76.3%
3lh4A00	3.10.450.10	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.50	37.0	3.89e-01	76.6%	84.3%
6eheA01	2.40.160.10	Mainly Beta › Beta Barrel › Porin › Porin	0.50	39.0	2.99e-01	83.1%	68.6%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
146266	295.1.1.8 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276	0.66	38.0	4.46e-01	79.8%	82.1%
4943962	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.60	41.0	4.43e-01	70.2%	90.5%
3249212	12.2.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain	0.55	40.0	4.20e-01	76.6%	85.2%
4937061	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	36.0	3.84e-01	70.2%	80.9%
5009319	11.1.4.23 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg	0.53	37.0	4.20e-01	76.6%	98.9%
3248518	243.1.1.12 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21	0.52	40.0	4.10e-01	80.6%	81.3%
3359195	5.1.3.118 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3	0.52	39.0	2.91e-01	79.0%	48.0%
4523830	243.1.1.12 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21	0.51	39.0	4.15e-01	79.8%	95.5%
3782105	868.1.1.4 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › VTC	0.51	45.0	3.42e-01	99.2%	68.5%