←Back to structures
YP_009808143.1
Arc-VirNC_048037__YP_009808143.1__HOT91-gp33__00033
Identity
- Accession:
- NC_048037 ↗
- Protein ID:
- YP_009808143.1 ↗
- Kingdom:
- archaea
Quality
68.3
mean pLDDT
Taxonomy
Zilligvirae›
Taleaviricota›
Tokiviricetes›
Ligamenvirales›
Lipothrixviridae›
Alphalipothrixvirus›
Sulfolobus_filamentous_virus_1
TaxID: 2304198
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-69
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l2hA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.70 | 47.0 | 3.66e-01 | 70.6% | 86.4% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 49.0 | 3.79e-01 | 80.9% | 86.6% |
| 2q5fA02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.62 | 43.0 | 3.54e-01 | 73.5% | 93.3% |
| 4ifsA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.60 | 45.0 | 3.57e-01 | 79.4% | 57.6% |
| 5hkeA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.60 | 53.0 | 3.40e-01 | 97.1% | 98.4% |
| 6f90A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.60 | 49.0 | 3.30e-01 | 91.2% | 63.8% |
| 2hezA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.58 | 50.0 | 3.28e-01 | 100.0% | 98.4% |
| 6o15A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 41.0 | 2.97e-01 | 82.4% | 62.7% |
| 3q87A00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 45.0 | 3.76e-01 | 91.2% | 98.4% |
| 2gcjA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.55 | 47.0 | 3.72e-01 | 92.6% | 58.2% |
| 2bjfA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.55 | 48.0 | 3.13e-01 | 100.0% | 36.5% |
| 2b5nB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 2.97e-01 | 97.1% | 37.7% |
| 1lbvA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.54 | 40.0 | 3.18e-01 | 85.3% | 39.1% |
| 4a0tA01 | 6.20.80.10 | Special › Other non-globular › Glycosyl hydrolase fold › | 0.53 | 37.0 | 3.84e-01 | 91.2% | 80.3% |
| 4msxA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 44.0 | 3.01e-01 | 98.5% | 94.4% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.53 | 44.0 | 3.09e-01 | 100.0% | 27.9% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 43.0 | 2.80e-01 | 94.1% | 94.9% |
| 4cciA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 2.95e-01 | 94.1% | 82.7% |
| 5chtB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 41.0 | 2.79e-01 | 94.1% | 93.7% |
| 2erfA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.19e-01 | 100.0% | 78.5% |
| 4m00A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 2.99e-01 | 97.1% | 59.7% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3248668 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.72 | 44.0 | 4.18e-01 | 92.6% | 52.5% |
| 3514431 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.70 | 39.0 | 4.74e-01 | 82.4% | 92.5% |
| 3799652 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.67 | 44.0 | 3.89e-01 | 98.5% | 47.4% |
| 4226766 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.67 | 44.0 | 3.49e-01 | 91.2% | 35.4% |
| 3550365 | 331.23.1.2 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C | 0.66 | 45.0 | 4.31e-01 | 83.8% | 61.5% |
| 2793306 | 4279.1.1.1 ↗ | a+b three layers › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DAC | 0.66 | 47.0 | 3.66e-01 | 77.9% | 75.9% |
| 3893040 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.65 | 37.0 | 4.36e-01 | 80.9% | 84.4% |
| 4198047 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.65 | 36.0 | 4.38e-01 | 77.9% | 92.5% |
| 4254770 | 4279.1.1.1 ↗ | a+b three layers › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DAC | 0.65 | 47.0 | 3.43e-01 | 77.9% | 64.2% |
| 3398420 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.64 | 35.0 | 4.20e-01 | 80.9% | 87.5% |
| 3541285 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.64 | 38.0 | 3.97e-01 | 83.8% | 65.0% |
| 380489 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.64 | 55.0 | 4.15e-01 | 94.1% | 85.5% |
| 3233229 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 34.0 | 4.12e-01 | 76.5% | 87.5% |
| 3295291 | 4286.1.1.1 ↗ | beta complex topology › At5g01610-like › At5g01610-like › At5g01610-like › DUF538 | 0.62 | 45.0 | 3.70e-01 | 75.0% | 47.0% |
| 3575826 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.62 | 36.0 | 3.99e-01 | 79.4% | 76.0% |
| 3405941 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.61 | 42.0 | 4.27e-01 | 92.6% | 72.1% |
| 3398945 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.61 | 35.0 | 2.96e-01 | 82.4% | 31.7% |
| 4029119 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 52.0 | 3.29e-01 | 100.0% | 37.1% |
| 3387566 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.59 | 45.0 | 3.57e-01 | 95.6% | 40.7% |
| 1289911 | 221.1.2.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4e,RS4NT | 0.58 | 46.0 | 3.91e-01 | 86.8% | 63.8% |
| 3273270 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 51.0 | 3.47e-01 | 100.0% | 49.0% |
| 3767166 | 79.1.1.31 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › ITI_HC_C | 0.58 | 45.0 | 3.98e-01 | 95.6% | 58.9% |
| 4945655 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 51.0 | 4.42e-01 | 100.0% | 65.0% |
| 3241867 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.57 | 36.0 | 3.65e-01 | 86.8% | 62.9% |
| 4965206 | 4221.1.1.3 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › PF26008 | 0.57 | 40.0 | 3.96e-01 | 76.5% | 71.4% |
| 4934826 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 46.0 | 3.08e-01 | 97.1% | 49.2% |
| 3251495 | 376.1.1.43 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C | 0.54 | 48.0 | 3.95e-01 | 100.0% | 81.6% |
| 3856901 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.54 | 44.0 | 2.86e-01 | 94.1% | 88.9% |
| 3587399 | 331.1.1.2 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Rep_trans | 0.54 | 39.0 | 2.99e-01 | 77.9% | 53.9% |
| 4957082 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.53 | 44.0 | 3.33e-01 | 91.2% | 54.1% |
| 3192325 | 376.1.1.43 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C | 0.53 | 47.0 | 3.45e-01 | 100.0% | 60.8% |
| 5078978 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 46.0 | 3.16e-01 | 100.0% | 71.7% |
| 3182704 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 44.0 | 2.56e-01 | 94.1% | 57.3% |
| 3271978 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 44.0 | 2.90e-01 | 97.1% | 97.5% |
| 1298746 | 10.1.1.45 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Bact_lectin | 0.53 | 45.0 | 3.16e-01 | 98.5% | 70.4% |
| 3586488 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 44.0 | 2.80e-01 | 95.6% | 96.9% |
| 3274867 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 43.0 | 2.88e-01 | 94.1% | 95.4% |
| 3517106 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 45.0 | 2.97e-01 | 100.0% | 38.9% |
| 3692594 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 44.0 | 2.80e-01 | 100.0% | 94.3% |
| 3801400 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 40.0 | 2.64e-01 | 83.8% | 32.4% |
| 5037561 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.52 | 43.0 | 3.49e-01 | 88.2% | 90.0% |
| 3447653 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 43.0 | 2.91e-01 | 98.5% | 41.3% |
| 3532456 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.51 | 42.0 | 2.86e-01 | 95.6% | 99.3% |
| 3374343 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 43.0 | 3.16e-01 | 100.0% | 76.6% |
| 3621466 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 42.0 | 2.63e-01 | 92.6% | 100.0% |
| 3912023 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 41.0 | 2.77e-01 | 95.6% | 94.8% |