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NC_048038.1__YP_009808206.1__HOT92_gp30__00030
Bact-VirNC_048038.1__YP_009808206.1__HOT92_gp30__00030
Identity
- Accession:
- NC_048038 ↗
- Kingdom:
- phage
Quality
72.7
mean pLDDT
Taxonomy
TaxID: 2301539
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-67
Domain cluster:
rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00487__D14-69
D2
high
residues 79-131
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iieA00 | 1.10.870.10 | Mainly Alpha › Orthogonal Bundle › HLA-dr Antigens Associated Invariant Chain; Chain A › MHC class II-associated invariant chain, trimerisation domain | 0.76 | 49.0 | 4.36e-01 | 81.1% | 46.7% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.71 | 56.0 | 4.00e-01 | 86.8% | 57.3% |
| 4ceiA05 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.71 | 60.0 | 4.33e-01 | 100.0% | 60.5% |
| 2kz6A01 | 6.10.140.1310 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 43.0 | 3.84e-01 | 71.7% | 59.3% |
| 3on3B00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.62 | 42.0 | 2.95e-01 | 71.7% | 24.6% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 48.0 | 3.86e-01 | 94.3% | 80.4% |
| 5dllA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.57 | 46.0 | 2.91e-01 | 94.3% | 20.8% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.57 | 45.0 | 3.14e-01 | 88.7% | 89.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017738 | 563.2.1.0 ↗ | alpha bundles › ATPD N-terminal domain-like › Cas Cmr5-like › Cas Cmr5-like | 0.73 | 60.0 | 4.42e-01 | 88.7% | 58.5% |
| 3518143 | 109.4.1.209 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Katanin_con80 | 0.72 | 63.0 | 4.18e-01 | 98.1% | 64.9% |
| 414118 | 191.1.1.46 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_44 | 0.72 | 45.0 | 3.43e-01 | 88.7% | 27.6% |
| 3281421 | 2007.1.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI | 0.70 | 55.0 | 3.67e-01 | 84.9% | 57.0% |
| 4129499 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.70 | 48.0 | 3.84e-01 | 84.9% | 36.2% |
| 3574002 | 109.4.1.209 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Katanin_con80 | 0.69 | 60.0 | 4.20e-01 | 100.0% | 50.8% |
| 3288179 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.67 | 52.0 | 3.44e-01 | 86.8% | 20.6% |
| 3519172 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 43.0 | 4.45e-01 | 75.5% | 74.0% |
| 3938822 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.64 | 56.0 | 3.74e-01 | 100.0% | 85.6% |
| 3171295 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 52.0 | 2.96e-01 | 96.2% | 29.3% |
| 3719185 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.63 | 57.0 | 3.70e-01 | 100.0% | 67.6% |
| 3203638 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.60 | 44.0 | 2.97e-01 | 79.2% | 36.1% |
| 3226377 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.60 | 47.0 | 3.14e-01 | 84.9% | 84.6% |
| 4177727 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.57 | 39.0 | 3.26e-01 | 81.1% | 35.5% |
| 3989601 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.57 | 43.0 | 4.14e-01 | 88.7% | 71.7% |
| 3329217 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.52 | 47.0 | 3.10e-01 | 98.1% | 40.5% |
D3
medium
residues 135-196