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NC_048040.1__YP_009808424.1__HOT94_gp083__00083
Bact-VirNC_048040.1__YP_009808424.1__HOT94_gp083__00083
Identity
- Accession:
- NC_048040 ↗
- Kingdom:
- phage
Quality
71.3
mean pLDDT
Taxonomy
TaxID: 2301694
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-72
Domain cluster:
rep: MW584196.1__QSM04241.1__PROPHIGD27-1_45__00045__D3-65
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.63 | 42.0 | 3.04e-01 | 70.1% | 62.4% |
| 4uy8X00 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.52 | 35.0 | 3.37e-01 | 70.1% | 72.7% |
| 1f94A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 39.0 | 4.01e-01 | 100.0% | 88.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.61 | 40.0 | 3.86e-01 | 100.0% | 57.5% | |
| 2604956 | 6073.1.1.2 ↗ | beta barrels › MMP1218-like › MMP1218-like › MMP1218-like › ArgZ-like_C_1st | 0.60 | 40.0 | 3.66e-01 | 100.0% | 52.9% |
| 4407558 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.58 | 41.0 | 4.29e-01 | 73.1% | 98.3% |
| 4154378 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.58 | 41.0 | 4.22e-01 | 74.6% | 98.5% |
| 3599041 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.58 | 41.0 | 3.31e-01 | 77.6% | 69.7% |
| 3730357 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.57 | 41.0 | 3.30e-01 | 77.6% | 77.9% |
| 4659288 | 389.6.1.5 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain › Furin-like_2 | 0.52 | 35.0 | 1.99e-01 | 86.6% | 5.1% |
| 4982926 | 1118.1.1.1 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › NFACT-R_1 | 0.52 | 41.0 | 2.98e-01 | 91.0% | 97.1% |
| 4491021 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.51 | 36.0 | 3.21e-01 | 76.1% | 91.4% |