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NC_048046.1__YP_009809544.1__HOU00_gp211__00375

Bact-Vir

NC_048046.1__YP_009809544.1__HOU00_gp211__00375

Identity

Accession:
NC_048046 ↗
Kingdom:
phage

Quality

82.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-69
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jmkC01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 42.0 3.08e-01 77.2% 87.8%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 48.0 4.34e-01 96.5% 92.8%
3umcD02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 45.0 4.11e-01 91.2% 96.2%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 43.0 3.90e-01 94.7% 82.1%
4ixjA02 3.30.1690.20 Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › 0.53 42.0 3.20e-01 93.0% 65.3%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 40.0 2.82e-01 86.0% 98.5%
3k49A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 37.0 2.29e-01 73.7% 16.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3336398 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 38.0 3.78e-01 71.9% 93.3%
3774407 109.21.1.3 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Sec16_C 0.52 41.0 2.32e-01 89.5% 39.2%