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NC_048046.1__YP_009809602.1__HOU00_gp153__00433
Bact-VirNC_048046.1__YP_009809602.1__HOU00_gp153__00433
Identity
- Accession:
- NC_048046 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Colossusvirus›
Caulobacter_phage_CcrPW
TaxID: 2283271
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-119
Domain cluster:
rep: KY290949.1__APU00782.1__X__00057__D18-127
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mz2I00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.62 | 45.0 | 4.26e-01 | 100.0% | 61.9% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 50.0 | 4.87e-01 | 100.0% | 83.5% |
| 2carB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.59 | 49.0 | 4.15e-01 | 92.0% | 71.6% |
| 1b78A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.57 | 49.0 | 4.16e-01 | 92.9% | 75.5% |
| 7alkA01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 51.0 | 4.56e-01 | 100.0% | 78.1% |
| 2uvaG09 | 2.40.128.700 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 35.0 | 3.53e-01 | 96.5% | 59.5% |
| 4bnqB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.56 | 48.0 | 4.04e-01 | 92.9% | 76.6% |
| 1x9yA01 | 3.10.500.10 | Alpha Beta › Roll › prostaphopain b, domain 1 › Staphopain proregion domain | 0.56 | 39.0 | 3.40e-01 | 100.0% | 47.1% |
| 6wwdB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.55 | 47.0 | 3.99e-01 | 92.9% | 77.9% |
| 3k0wA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 34.0 | 3.73e-01 | 100.0% | 77.2% |
| 5mw5A01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 4.25e-01 | 97.3% | 74.2% |
| 1h6fA00 | 2.60.40.820 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription factor, T-box | 0.53 | 48.0 | 4.09e-01 | 100.0% | 70.7% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.53 | 38.0 | 3.82e-01 | 76.1% | 91.5% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.52 | 34.0 | 3.68e-01 | 95.6% | 78.7% |
| 3frmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 38.0 | 3.03e-01 | 77.0% | 99.2% |
| 2nn6A01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.52 | 47.0 | 3.44e-01 | 100.0% | 50.7% |
| 3fbqA02 | 2.60.40.1640 | Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. | 0.52 | 46.0 | 4.32e-01 | 100.0% | 98.6% |
| 3fcsA02 | 2.60.40.1460 | Mainly Beta › Sandwich › Immunoglobulin-like › Integrin domains. Chain A, domain 2 | 0.51 | 45.0 | 4.10e-01 | 100.0% | 88.3% |
| 2hzmB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.51 | 40.0 | 3.24e-01 | 85.8% | 63.9% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3611020 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 48.0 | 3.92e-01 | 100.0% | 42.0% |
| 3275542 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 52.0 | 4.83e-01 | 100.0% | 75.0% |
| 4170035 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.60 | 51.0 | 4.05e-01 | 92.9% | 76.6% |
| 3508885 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.13e-01 | 100.0% | 60.0% |
| 5016503 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.59 | 38.0 | 3.92e-01 | 73.5% | 67.3% |
| 4303181 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.59 | 50.0 | 4.16e-01 | 93.8% | 72.7% |
| 3962300 | 7504.1.1.0 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like | 0.59 | 47.0 | 4.00e-01 | 85.8% | 75.7% |
| 4947842 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.59 | 40.0 | 3.50e-01 | 70.8% | 66.3% |
| 4029036 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 39.0 | 4.35e-01 | 74.3% | 86.7% |
| 4961140 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.58 | 50.0 | 4.30e-01 | 93.8% | 77.2% |
| 4402449 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.58 | 51.0 | 4.18e-01 | 96.5% | 73.7% |
| None | — | 0.58 | 49.0 | 4.17e-01 | 93.8% | 73.2% | |
| 4180376 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.58 | 51.0 | 4.22e-01 | 96.5% | 74.5% |
| 4056106 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.58 | 49.0 | 4.13e-01 | 92.9% | 76.3% |
| 4609162 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.57 | 48.0 | 4.07e-01 | 93.8% | 76.0% |
| 4943139 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.57 | 49.0 | 4.15e-01 | 93.8% | 75.8% |
| 4968624 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.57 | 49.0 | 4.13e-01 | 93.8% | 76.8% |
| 4322161 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.57 | 50.0 | 4.19e-01 | 96.5% | 74.1% |
| 4942285 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 36.0 | 4.24e-01 | 75.2% | 97.3% |
| 4927440 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.56 | 38.0 | 4.06e-01 | 95.6% | 79.0% |
| 5028431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 37.0 | 4.21e-01 | 76.1% | 95.0% |
| 3240771 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 50.0 | 4.03e-01 | 100.0% | 85.9% |
| 4588443 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.55 | 48.0 | 4.05e-01 | 96.5% | 75.8% |
| 3996461 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.55 | 49.0 | 3.68e-01 | 99.1% | 57.2% |
| 3781112 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.55 | 39.0 | 2.61e-01 | 100.0% | 17.3% |
| 3217851 | 302.2.1.0 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit | 0.55 | 45.0 | 4.54e-01 | 95.6% | 88.7% |
| 3592929 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 48.0 | 3.54e-01 | 100.0% | 66.0% |
| 3544039 | 11.2.1.19 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 | 0.54 | 47.0 | 3.42e-01 | 97.3% | 39.4% |
| 3598097 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 47.0 | 3.56e-01 | 100.0% | 59.7% |
| 3491781 | 3156.1.1.18 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › CLPTM1 | 0.53 | 41.0 | 3.44e-01 | 82.3% | 57.1% |
| 3931683 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 46.0 | 3.90e-01 | 99.1% | 91.3% |
| 3688954 | 283.1.1.3 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase | 0.52 | 42.0 | 3.95e-01 | 100.0% | 70.0% |
| 3602567 | 304.122.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nitrogen repressor-like proteins › Nitrogen repressor-like proteins › NRD1_2 | 0.52 | 43.0 | 4.18e-01 | 91.2% | 92.3% |
| 3578057 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.52 | 26.0 | 3.46e-01 | 79.6% | 96.4% |
| 3169052 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.51 | 41.0 | 2.69e-01 | 99.1% | 19.8% |
| 3210911 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.50 | 40.0 | 4.15e-01 | 97.3% | 92.4% |
| 3248448 | 1116.1.1.0 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain | 0.50 | 45.0 | 3.76e-01 | 100.0% | 77.0% |