←Back to structures
NC_048048.2__YP_009810333.1__HOU03_gp121__00121
Bact-VirNC_048048.2__YP_009810333.1__HOU03_gp121__00121
Identity
- Accession:
- NC_048048 ↗
- Kingdom:
- phage
Quality
59.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Bertelyvirus›
Caulobacter_phage_CcrSC
TaxID: 2283272
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-50
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6zepA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.59 | 48.0 | 2.97e-01 | 97.8% | 92.2% |
| 3ikwA02 | 3.10.540.20 | Alpha Beta › Roll › duf1285 like fold › | 0.53 | 42.0 | 3.84e-01 | 100.0% | 80.0% |
| 1w2lA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.52 | 40.0 | 3.39e-01 | 97.8% | 46.4% |
| 4govA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 38.0 | 2.80e-01 | 80.4% | 32.1% |
| 1h0hA02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 2.71e-01 | 97.8% | 95.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025462 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.83 | 60.0 | 5.43e-01 | 76.1% | 80.0% |
| 4950662 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.67 | 47.0 | 3.04e-01 | 71.7% | 17.6% |
| 3716962 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.56 | 45.0 | 3.12e-01 | 95.7% | 88.6% |
| 4056680 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.56 | 45.0 | 3.34e-01 | 89.1% | 74.2% |