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NC_048048.2__YP_009810333.1__HOU03_gp121__00121

Bact-Vir

NC_048048.2__YP_009810333.1__HOU03_gp121__00121

Identity

Accession:
NC_048048 ↗
Kingdom:
phage

Quality

59.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-50
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6zepA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 48.0 2.97e-01 97.8% 92.2%
3ikwA02 3.10.540.20 Alpha Beta › Roll › duf1285 like fold › 0.53 42.0 3.84e-01 100.0% 80.0%
1w2lA00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.52 40.0 3.39e-01 97.8% 46.4%
4govA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 38.0 2.80e-01 80.4% 32.1%
1h0hA02 3.40.50.740 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 41.0 2.71e-01 97.8% 95.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4025462 4076.1.1.1 a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N 0.83 60.0 5.43e-01 76.1% 80.0%
4950662 1056.1.1.1 a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD 0.67 47.0 3.04e-01 71.7% 17.6%
3716962 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.56 45.0 3.12e-01 95.7% 88.6%
4056680 378.1.1.9 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 0.56 45.0 3.34e-01 89.1% 74.2%