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NC_048048.2__YP_009810607.1__HOU03_gp291__00394
Bact-VirNC_048048.2__YP_009810607.1__HOU03_gp291__00394
Identity
- Accession:
- NC_048048 ↗
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Bertelyvirus›
Caulobacter_phage_CcrSC
TaxID: 2283272
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-71
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6muwH00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.58 | 46.0 | 3.44e-01 | 92.6% | 91.3% |
| 2a6hC03 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.57 | 36.0 | 2.64e-01 | 100.0% | 23.9% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 38.0 | 3.25e-01 | 73.5% | 40.7% |
| 6qm7M00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 46.0 | 3.41e-01 | 100.0% | 40.7% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.55 | 38.0 | 3.26e-01 | 73.5% | 84.7% |
| 1kvzA00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.54 | 41.0 | 3.66e-01 | 88.2% | 78.5% |
| 2z9iC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 47.0 | 4.27e-01 | 98.5% | 78.3% |
| 1ykdB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 44.0 | 3.36e-01 | 100.0% | 64.7% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.52 | 39.0 | 3.68e-01 | 100.0% | 64.8% |
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.52 | 44.0 | 3.99e-01 | 95.6% | 86.2% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.27e-01 | 77.9% | 85.6% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 36.0 | 3.01e-01 | 100.0% | 40.0% |
| 1iucA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.50 | 41.0 | 2.82e-01 | 100.0% | 95.2% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024071 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 41.0 | 3.51e-01 | 73.5% | 43.5% |
| 4275468 | 223.1.1.95 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › NtrY_N | 0.59 | 48.0 | 3.58e-01 | 89.7% | 40.0% |
| 4973409 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.58 | 50.0 | 3.50e-01 | 100.0% | 92.9% |
| 5023758 | 210.1.2.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain | 0.55 | 46.0 | 3.28e-01 | 100.0% | 34.1% |
| 3998356 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 35.0 | 4.17e-01 | 70.6% | 100.0% |
| 3625494 | 210.1.2.8 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2 | 0.55 | 46.0 | 3.16e-01 | 100.0% | 30.0% |
| 4933387 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.55 | 43.0 | 4.16e-01 | 97.1% | 76.2% |
| 3957726 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.54 | 44.0 | 3.34e-01 | 92.6% | 60.6% |
| 3298893 | 60.1.1.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › SPOC | 0.54 | 45.0 | 3.73e-01 | 95.6% | 91.2% |
| 3704984 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 45.0 | 2.86e-01 | 100.0% | 29.1% |
| 3936914 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.53 | 48.0 | 3.84e-01 | 100.0% | 89.2% |
| 3833223 | 60.1.1.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › SPOC | 0.53 | 45.0 | 3.58e-01 | 98.5% | 79.3% |
| 3688395 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.52 | 44.0 | 3.43e-01 | 100.0% | 45.5% |
| 3932751 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.51 | 46.0 | 3.69e-01 | 100.0% | 90.0% |
| 3407530 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.51 | 46.0 | 3.63e-01 | 100.0% | 88.1% |
| 3997015 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 45.0 | 3.65e-01 | 100.0% | 89.2% |
| 3230925 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 45.0 | 3.62e-01 | 100.0% | 89.2% |
| 3738030 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 46.0 | 3.60e-01 | 100.0% | 88.1% |
| 3624708 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 45.0 | 3.58e-01 | 100.0% | 85.9% |
| 3551142 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 45.0 | 3.49e-01 | 100.0% | 81.4% |