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NC_048048.2__YP_009810663.1__HOU03_gp235__00450

Bact-Vir

NC_048048.2__YP_009810663.1__HOU03_gp235__00450

Identity

Accession:
NC_048048 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-99
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 4.63e-01 73.2% 52.5%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 4.50e-01 73.2% 49.6%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.81e-01 73.2% 94.4%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 4.50e-01 73.2% 49.3%
3b73B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 5.98e-01 97.9% 87.6%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 4.27e-01 73.2% 42.9%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 5.35e-01 73.2% 80.6%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 48.0 4.43e-01 73.2% 52.4%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 4.52e-01 73.2% 50.7%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 4.47e-01 73.2% 50.7%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 4.49e-01 73.2% 50.7%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 4.61e-01 73.2% 54.5%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 4.56e-01 73.2% 53.7%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 49.0 4.29e-01 74.2% 47.5%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 4.37e-01 73.2% 47.9%
3zmdA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 4.40e-01 73.2% 50.0%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 48.0 4.32e-01 73.2% 49.6%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.99e-01 73.2% 71.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.51e-01 73.2% 54.0%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.51e-01 73.2% 52.9%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.13e-01 74.2% 74.0%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 5.12e-01 73.2% 82.3%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 46.0 3.97e-01 73.2% 43.0%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 4.39e-01 73.2% 52.5%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 5.27e-01 73.2% 89.3%
3df8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.76e-01 73.2% 66.1%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.38e-01 73.2% 52.6%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 4.96e-01 74.2% 74.2%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 48.0 4.24e-01 72.2% 51.1%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.47e-01 73.2% 57.9%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.25e-01 73.2% 51.4%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 48.0 4.43e-01 73.2% 58.3%
3qphA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.75e-01 85.6% 72.2%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 49.0 4.88e-01 79.4% 74.5%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.05e-01 73.2% 47.7%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 4.75e-01 96.9% 76.7%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.66 61.0 4.57e-01 100.0% 90.1%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.63 57.0 4.39e-01 100.0% 91.7%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 41.0 4.33e-01 73.2% 74.2%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 41.0 4.41e-01 73.2% 80.5%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.80e-01 93.8% 87.8%
2a5yC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.05e-01 73.2% 63.1%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 52.0 4.58e-01 94.8% 86.0%
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 51.0 4.49e-01 100.0% 81.2%
1k78B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.81e-01 72.2% 86.3%
2cw7A02 1.10.10.1010 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV 0.55 42.0 3.67e-01 81.4% 61.6%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
379864 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.78 50.0 4.51e-01 73.2% 49.2%
4975635 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 48.0 3.81e-01 73.2% 32.1%
5030617 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 54.0 5.38e-01 74.2% 73.0%
5034307 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 3.95e-01 77.3% 31.6%
4970541 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 47.0 4.71e-01 73.2% 63.0%
4287688 101.1.2.46 alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg 0.74 52.0 5.29e-01 73.2% 77.9%
4970940 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 53.0 5.11e-01 76.3% 66.4%
140762 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.73 50.0 4.41e-01 73.2% 48.9%
3587362 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.73 50.0 4.42e-01 73.2% 49.6%
4014136 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 5.19e-01 73.2% 92.6%
5024796 101.1.2.643 alpha arrays › HTH › HTH › winged helix domain › AAA_assoc_C 0.72 58.0 4.98e-01 85.6% 57.3%
5044182 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 57.0 6.06e-01 83.5% 96.5%
4952743 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.72 51.0 4.33e-01 73.2% 48.0%
4979916 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 4.56e-01 73.2% 58.5%
143631 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.72 49.0 4.28e-01 73.2% 47.3%
5005002 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.71 50.0 4.37e-01 73.2% 49.7%
5048947 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 55.0 5.49e-01 81.4% 82.0%
4955611 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 50.0 4.94e-01 73.2% 72.1%
374782 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.71 49.0 4.26e-01 73.2% 48.6%
4649222 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.71 50.0 4.53e-01 73.2% 55.4%
4928059 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.71 50.0 4.52e-01 73.2% 55.4%
3477983 101.1.2.199 alpha arrays › HTH › HTH › winged helix domain › FAN1_HTH 0.71 48.0 4.07e-01 73.2% 42.5%
166472 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.71 50.0 4.39e-01 73.2% 52.5%
3685193 101.1.2.183 alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH 0.71 50.0 5.07e-01 73.2% 90.5%
3184109 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.70 56.0 5.22e-01 85.6% 90.8%
167954 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.70 49.0 4.25e-01 73.2% 49.0%
4987371 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 4.63e-01 73.2% 80.9%
4944093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 5.80e-01 100.0% 92.2%
4928656 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 5.10e-01 84.5% 95.0%
3208874 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.69 55.0 5.10e-01 84.5% 94.2%
4996621 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 48.0 4.81e-01 73.2% 78.0%
4984660 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.68 49.0 4.85e-01 78.4% 72.0%
5035255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 48.0 4.87e-01 73.2% 77.9%
4950772 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 48.0 4.75e-01 73.2% 71.0%
3351739 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.67 47.0 3.92e-01 72.2% 50.3%
3600167 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 54.0 5.08e-01 85.6% 91.3%
3236695 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 47.0 4.33e-01 73.2% 80.8%
3646165 101.1.2.245 alpha arrays › HTH › HTH › winged helix domain › PORR 0.67 50.0 5.03e-01 80.4% 87.0%
3281207 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 47.0 4.90e-01 96.9% 80.0%
4968041 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.65 52.0 4.50e-01 84.5% 98.6%
3819311 101.1.2.516 alpha arrays › HTH › HTH › winged helix domain › PF25895 0.65 46.0 4.19e-01 73.2% 78.4%
3942666 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 45.0 4.52e-01 95.9% 71.4%
1346824 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.64 47.0 4.42e-01 75.3% 67.2%
4992547 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.64 48.0 4.52e-01 79.4% 65.8%
4100982 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.64 44.0 4.82e-01 80.4% 86.3%
4091599 4156.1.1.6 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.64 58.0 4.36e-01 100.0% 86.5%
3997739 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.63 44.0 3.53e-01 87.6% 36.4%
3867745 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.63 44.0 3.63e-01 84.5% 40.6%
3693546 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.63 56.0 5.48e-01 100.0% 89.5%
3733518 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.62 56.0 4.96e-01 97.9% 89.6%
3703451 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.61 43.0 4.42e-01 72.2% 81.1%
3505605 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.61 42.0 4.40e-01 74.2% 76.7%
3239997 4156.1.1.2 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C 0.60 53.0 4.11e-01 95.9% 90.5%
4599667 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 45.0 3.74e-01 96.9% 45.3%
3486335 320.4.1.0 a+b two layers › R3H domain-like › PUB domain › PUB domain 0.59 43.0 3.83e-01 77.3% 55.7%
4937503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.36e-01 96.9% 66.7%
3485716 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.56 49.0 3.89e-01 94.8% 90.0%
4085907 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.56 50.0 3.42e-01 100.0% 90.1%
5028348 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.54 47.0 3.76e-01 95.9% 78.5%
3602755 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.51 33.0 3.60e-01 72.2% 82.7%
3518360 2004.1.1.560 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_4, AAA_34 0.50 38.0 2.31e-01 80.4% 16.2%