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NC_048048.2__YP_009810721.1__HOU03_gp009__00009

Bact-Vir

NC_048048.2__YP_009810721.1__HOU03_gp009__00009

Identity

Accession:
NC_048048 ↗
Kingdom:
phage

Quality

91.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Bertelyvirus› Caulobacter_phage_CcrSC

TaxID: 2283272

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-97
PDB
Domain cluster: rep: NC_041878.1__YP_009594586.1__FDG95_gp046__00046__D4-110
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lydA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.61 39.0 3.47e-01 90.6% 44.4%
3qldA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 51.0 4.43e-01 100.0% 81.6%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.58 34.0 3.27e-01 87.5% 47.8%
1kczA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 49.0 4.14e-01 99.0% 84.7%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 42.0 2.91e-01 82.3% 37.6%
2pgwA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 49.0 4.25e-01 100.0% 88.0%
3px5A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 48.0 4.56e-01 100.0% 94.8%
3jvaA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 48.0 4.56e-01 99.0% 92.1%
8in8C01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 48.0 3.54e-01 100.0% 95.0%
1tkkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 47.0 4.49e-01 99.0% 93.0%
1jpdX01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 45.0 4.47e-01 99.0% 90.9%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 46.0 4.32e-01 100.0% 92.7%
3ik4B01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 46.0 4.39e-01 100.0% 92.4%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 46.0 4.26e-01 100.0% 85.0%
2qddA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 46.0 4.20e-01 100.0% 86.9%
3gd6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 46.0 4.07e-01 100.0% 91.5%
2vqeE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 32.0 3.71e-01 86.5% 92.2%
2zadA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 45.0 4.34e-01 99.0% 91.2%
4jhmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 45.0 4.29e-01 99.0% 89.7%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 34.0 3.66e-01 97.9% 81.7%
2chrA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 44.0 4.04e-01 99.0% 87.4%
1ceeB00 3.90.810.10 Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain 0.51 23.0 2.84e-01 70.8% 66.1%
3ugvA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 44.0 4.04e-01 99.0% 84.1%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3250629 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.66 38.0 3.68e-01 89.6% 51.4%
3270697 223.2.1.25 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 0.62 46.0 3.90e-01 95.8% 46.1%
3904452 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 33.0 3.15e-01 86.5% 42.6%
5077285 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.60 41.0 2.73e-01 71.9% 64.4%
3282536 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.57 39.0 4.19e-01 86.5% 83.7%
143098 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.57 50.0 4.58e-01 99.0% 91.5%
140145 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.54 48.0 4.43e-01 99.0% 84.7%
5027407 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.54 47.0 4.47e-01 97.9% 93.8%
163996 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.54 47.0 4.33e-01 99.0% 84.4%
135609 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.54 48.0 4.38e-01 100.0% 87.5%
3396837 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.54 35.0 3.85e-01 77.1% 90.0%
3726789 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.54 45.0 3.23e-01 99.0% 44.1%
3821015 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.53 47.0 4.03e-01 99.0% 74.8%
5840 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.53 46.0 4.29e-01 99.0% 88.0%
1239743 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.52 46.0 4.29e-01 100.0% 85.4%
3264986 220.1.1.11 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.52 30.0 2.97e-01 86.5% 48.2%
4014798 2011.1.1.0 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases 0.52 44.0 3.12e-01 97.9% 66.2%
4305490 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.52 46.0 4.11e-01 99.0% 83.0%
1174509 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.52 46.0 4.26e-01 99.0% 82.6%
145398 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.50 44.0 4.00e-01 99.0% 80.8%