←Back to structures
NC_048053.1__YP_009811375.1__HOU08_gp261__00261
Bact-VirNC_048053.1__YP_009811375.1__HOU08_gp261__00261
Identity
- Accession:
- NC_048053 ↗
- Kingdom:
- phage
Quality
85.1
mean pLDDT
Taxonomy
TaxID: 2283031
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-140
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8an5A01 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.74 | 62.0 | 5.12e-01 | 91.7% | 77.6% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.69 | 58.0 | 4.95e-01 | 90.7% | 89.1% |
| 1fafA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.57 | 25.0 | 2.88e-01 | 99.1% | 51.9% |
| 4a0gD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 3.18e-01 | 80.6% | 95.2% |
| 4cidA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.53e-01 | 94.4% | 98.3% |
| 3jr7A03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.52 | 33.0 | 3.18e-01 | 91.7% | 56.1% |
| 4jixB00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.51 | 39.0 | 3.98e-01 | 88.0% | 85.6% |
| 1luzA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 25.0 | 2.79e-01 | 80.6% | 57.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3059418 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.74 | 62.0 | 5.10e-01 | 91.7% | 76.8% |
| 5030984 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 61.0 | 5.06e-01 | 90.7% | 80.0% |
| 4958433 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 61.0 | 5.76e-01 | 97.2% | 100.0% |
| 5039359 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 57.0 | 4.92e-01 | 90.7% | 81.2% |
| 4928276 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 57.0 | 4.51e-01 | 90.7% | 66.7% |
| 4993673 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 57.0 | 4.80e-01 | 90.7% | 81.5% |
| 4940185 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.68 | 61.0 | 5.73e-01 | 98.1% | 100.0% |
| 4984763 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.68 | 57.0 | 4.68e-01 | 92.6% | 66.3% |
| 5080190 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.67 | 56.0 | 4.43e-01 | 90.7% | 56.6% |
| 3281252 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 60.0 | 4.76e-01 | 100.0% | 65.9% |
| 5078572 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.65 | 53.0 | 4.80e-01 | 89.8% | 96.0% |
| 3943586 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.65 | 54.0 | 5.24e-01 | 93.5% | 100.0% |
| 5004973 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.54 | 40.0 | 3.29e-01 | 80.6% | 95.0% |
| 5012092 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.52 | 42.0 | 3.41e-01 | 90.7% | 63.6% |
| 3640306 | 2007.2.3.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase3 | 0.51 | 38.0 | 2.89e-01 | 78.7% | 74.7% |
| 3867030 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.51 | 41.0 | 3.25e-01 | 89.8% | 47.8% |
| 4873531 | 4275.1.1.6 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube | 0.51 | 41.0 | 3.52e-01 | 88.0% | 85.5% |