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NC_048077.1__YP_009813483.1__HOU32_gp038__00038
Bact-VirNC_048077.1__YP_009813483.1__HOU32_gp038__00038
Identity
- Accession:
- NC_048077 ↗
- Kingdom:
- phage
Quality
61.5
mean pLDDT
Taxonomy
TaxID: 2382310
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-93_209-226
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7xinA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.71 | 50.0 | 5.01e-01 | 72.5% | 100.0% |
| 4zm3B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 46.0 | 4.21e-01 | 74.3% | 76.1% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 46.0 | 3.86e-01 | 75.2% | 59.6% |
| 6u26A01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.62 | 32.0 | 3.61e-01 | 78.0% | 63.6% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 34.0 | 3.37e-01 | 100.0% | 50.4% |
| 1svvB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 43.0 | 4.70e-01 | 73.4% | 98.9% |
| 5a4aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.60 | 32.0 | 2.59e-01 | 97.2% | 27.4% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 31.0 | 3.75e-01 | 79.8% | 77.5% |
| 5zg8A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 49.0 | 3.46e-01 | 89.0% | 90.9% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.57 | 31.0 | 3.48e-01 | 75.2% | 69.5% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 30.0 | 3.74e-01 | 79.8% | 83.8% |
| 3rq1D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 40.0 | 3.53e-01 | 74.3% | 54.2% |
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 36.0 | 3.97e-01 | 78.9% | 84.7% |
| 1d0xA04 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.55 | 31.0 | 2.89e-01 | 78.9% | 46.0% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.53 | 34.0 | 3.37e-01 | 89.0% | 58.7% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.53 | 36.0 | 3.89e-01 | 70.6% | 92.6% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.53 | 29.0 | 3.20e-01 | 77.1% | 66.3% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 36.0 | 3.91e-01 | 70.6% | 90.1% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 36.0 | 3.01e-01 | 74.3% | 85.8% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4097938 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.64 | 45.0 | 4.50e-01 | 71.6% | 89.1% |
| 5072114 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.59 | 32.0 | 2.92e-01 | 100.0% | 38.0% |
| 5074343 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.58 | 32.0 | 3.75e-01 | 94.5% | 77.3% |
| 3806737 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.56 | 35.0 | 3.25e-01 | 87.2% | 49.3% |
| 3988949 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.56 | 39.0 | 3.31e-01 | 72.5% | 76.1% |
| 4931923 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.55 | 29.0 | 3.39e-01 | 71.6% | 70.0% |
| 4995864 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 40.0 | 3.46e-01 | 77.1% | 88.6% |
| 3980839 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.55 | 39.0 | 3.53e-01 | 75.2% | 71.9% |
| 4052768 | 3675.1.1.0 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain | 0.54 | 40.0 | 3.62e-01 | 77.1% | 64.0% |
| 3915214 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 31.0 | 3.76e-01 | 78.0% | 88.6% |
| 4182188 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.54 | 37.0 | 3.26e-01 | 81.7% | 48.1% |
| 3965385 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.54 | 30.0 | 3.61e-01 | 71.6% | 84.3% |
| 3700503 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 31.0 | 2.51e-01 | 94.5% | 30.7% |
| 5071263 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 32.0 | 3.49e-01 | 96.3% | 74.4% |
| 3056509 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.51 | 36.0 | 3.08e-01 | 74.3% | 56.4% |
| 4310765 | 131.1.1.4 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc | 0.51 | 38.0 | 2.53e-01 | 78.0% | 70.5% |
| 4183358 | 2006.1.1.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.50 | 35.0 | 3.11e-01 | 72.5% | 92.7% |
| 5012372 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.50 | 35.0 | 3.11e-01 | 72.5% | 92.7% |
D2
high
residues 98-202