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NC_048077.1__YP_009813558.1__HOU32_gp113__00113
Bact-VirNC_048077.1__YP_009813558.1__HOU32_gp113__00113
Identity
- Accession:
- NC_048077 ↗
- Kingdom:
- phage
Quality
75.4
mean pLDDT
Taxonomy
TaxID: 2382310
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-71
Domain cluster:
rep: NC_061451.1__YP_010303274.1__MPK74_gp133__00133__D23-61
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kxeA00 | 1.10.8.800 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain | 0.58 | 43.0 | 3.97e-01 | 81.1% | 68.1% |
| 2bduA02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.56 | 41.0 | 3.74e-01 | 79.2% | 89.2% |
| 1cbyA00 | 3.40.198.10 | Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like | 0.55 | 43.0 | 2.95e-01 | 92.5% | 31.7% |
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.54 | 35.0 | 3.68e-01 | 75.5% | 75.0% |
| 3mgdB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 41.0 | 2.97e-01 | 84.9% | 57.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3617570 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.58 | 44.0 | 3.29e-01 | 88.7% | 100.0% |
| None | — | 0.58 | 45.0 | 2.85e-01 | 92.5% | 95.5% | |
| 3680188 | 2484.1.1.50 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT | 0.57 | 46.0 | 3.22e-01 | 98.1% | 73.2% |
| 5000806 | 251.1.1.1 ↗ | a+b two layers › FYSH domain › FYSH domain › FYSH domain › SBDS | 0.54 | 40.0 | 3.11e-01 | 77.4% | 49.6% |
| 4061383 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.51 | 39.0 | 3.73e-01 | 94.3% | 77.1% |
| 5021354 | 101.1.2.619 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_33 | 0.51 | 39.0 | 3.76e-01 | 88.7% | 80.0% |
| 3311115 | 101.1.10.46 ↗ | alpha arrays › HTH › HTH › Cyclin-like › ELP3_N | 0.51 | 39.0 | 3.68e-01 | 94.3% | 98.6% |