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NC_048077.1__YP_009813695.1__HOU32_gp250__00250
Bact-VirNC_048077.1__YP_009813695.1__HOU32_gp250__00250
Identity
- Accession:
- NC_048077 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Taxonomy
TaxID: 2382310
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-89
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.69 | 42.0 | 4.79e-01 | 79.8% | 82.1% |
| 2mj0A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.67 | 40.0 | 4.50e-01 | 77.5% | 78.8% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.66 | 41.0 | 4.60e-01 | 76.4% | 83.3% |
| 2l03A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.66 | 42.0 | 4.51e-01 | 76.4% | 77.0% |
| 3mwbB03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 46.0 | 4.54e-01 | 91.0% | 69.5% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 48.0 | 4.44e-01 | 80.9% | 94.0% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 42.0 | 4.48e-01 | 86.5% | 78.5% |
| 3cedA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 42.0 | 4.16e-01 | 80.9% | 66.3% |
| 3hh7A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.60 | 40.0 | 4.61e-01 | 77.5% | 93.8% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 42.0 | 4.15e-01 | 87.6% | 67.0% |
| 3nwgA02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.60 | 51.0 | 4.92e-01 | 92.1% | 100.0% |
| 1s6lA02 | 3.15.10.60 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Alkylmercury lyase | 0.60 | 48.0 | 4.25e-01 | 86.5% | 64.3% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 42.0 | 4.29e-01 | 86.5% | 74.2% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.60 | 44.0 | 4.33e-01 | 77.5% | 93.7% |
| 2c42A05 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 4.18e-01 | 82.0% | 98.3% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.60 | 36.0 | 3.88e-01 | 87.6% | 71.1% |
| 2muoA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.59 | 39.0 | 4.11e-01 | 75.3% | 73.2% |
| 2j5aA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.58 | 48.0 | 4.55e-01 | 96.6% | 75.5% |
| 8cwoF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.56 | 41.0 | 4.17e-01 | 77.5% | 80.0% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.56 | 45.0 | 4.00e-01 | 100.0% | 60.3% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.56 | 37.0 | 3.20e-01 | 76.4% | 43.2% |
| 2n99A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 41.0 | 4.40e-01 | 78.7% | 94.7% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 41.0 | 3.34e-01 | 79.8% | 83.1% |
| 4z80A01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.55 | 41.0 | 3.78e-01 | 78.7% | 76.5% |
| 3gk6A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.55 | 39.0 | 3.35e-01 | 76.4% | 85.6% |
| 3p3dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 41.0 | 4.22e-01 | 93.3% | 82.8% |
| 1ywhC03 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.54 | 39.0 | 4.00e-01 | 78.7% | 90.9% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 40.0 | 3.89e-01 | 80.9% | 87.3% |
| 3e1uA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 39.0 | 3.21e-01 | 82.0% | 83.7% |
| 2z61A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 33.0 | 2.76e-01 | 89.9% | 35.8% |
| 5uazA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 41.0 | 4.04e-01 | 96.6% | 80.9% |
| 2cq4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 38.0 | 3.72e-01 | 85.4% | 74.2% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3602746 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 47.0 | 4.92e-01 | 86.5% | 77.5% |
| 4671158 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.63 | 47.0 | 3.34e-01 | 78.7% | 57.8% |
| 3365659 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.62 | 47.0 | 4.75e-01 | 96.6% | 81.1% |
| 4598948 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.62 | 41.0 | 4.64e-01 | 74.2% | 92.3% |
| 5002100 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 41.0 | 4.04e-01 | 92.1% | 61.0% |
| 3931138 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 48.0 | 3.50e-01 | 98.9% | 30.8% |
| 4022197 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 46.0 | 4.68e-01 | 95.5% | 78.9% |
| 5051481 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 39.0 | 3.87e-01 | 91.0% | 60.0% |
| 4599322 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.61 | 46.0 | 4.68e-01 | 94.4% | 81.1% |
| 4534824 | 382.1.1.7 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type | 0.61 | 41.0 | 4.26e-01 | 79.8% | 74.1% |
| 3496071 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 43.0 | 4.29e-01 | 94.4% | 73.3% |
| 1296875 | 382.1.1.7 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type | 0.60 | 40.0 | 4.34e-01 | 78.7% | 84.7% |
| 3775096 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.60 | 42.0 | 4.25e-01 | 74.2% | 76.7% |
| 4207565 | 4114.1.1.1 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › PP_kinase | 0.59 | 47.0 | 3.78e-01 | 86.5% | 69.7% |
| 3233754 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 45.0 | 4.40e-01 | 97.8% | 74.0% |
| 5065444 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 45.0 | 4.25e-01 | 91.0% | 68.6% |
| 4433786 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.58 | 39.0 | 4.05e-01 | 70.8% | 87.1% |
| 4021702 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.56 | 48.0 | 3.52e-01 | 95.5% | 63.9% |
| 3396686 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.56 | 42.0 | 4.23e-01 | 80.9% | 93.3% |
| 3619664 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 39.0 | 3.30e-01 | 82.0% | 43.0% |
| 1886648 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.56 | 41.0 | 4.40e-01 | 78.7% | 94.7% |
| 4199730 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 39.0 | 3.78e-01 | 75.3% | 91.4% |
| 3621206 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 39.0 | 3.46e-01 | 77.5% | 91.7% |
| 3373154 | 3397.1.1.0 ↗ | a+b complex topology › Tic22 › Tic22 › Tic22 | 0.54 | 38.0 | 3.97e-01 | 80.9% | 82.5% |
| 3525531 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.54 | 39.0 | 4.02e-01 | 78.7% | 89.4% |
| 3540023 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.53 | 43.0 | 4.31e-01 | 91.0% | 92.2% |
| 4013188 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.52 | 45.0 | 3.34e-01 | 100.0% | 51.8% |
| 3460588 | 207.1.1.35 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8,Island | 0.51 | 42.0 | 2.99e-01 | 91.0% | 56.9% |
| 3611126 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 45.0 | 4.07e-01 | 100.0% | 71.2% |
| 3724246 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.51 | 44.0 | 3.19e-01 | 100.0% | 52.9% |
| 3857592 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.51 | 41.0 | 4.17e-01 | 91.0% | 90.0% |
| 5041672 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.50 | 37.0 | 3.61e-01 | 79.8% | 82.5% |
| 3310602 | 207.1.1.401 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8, Island | 0.50 | 41.0 | 2.59e-01 | 92.1% | 38.7% |
| 4243894 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.50 | 44.0 | 3.23e-01 | 100.0% | 49.8% |