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NC_048080.1__YP_009813998.1__HOU35_gp033__00144
Bact-VirNC_048080.1__YP_009813998.1__HOU35_gp033__00144
Identity
- Accession:
- NC_048080 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Taxonomy
TaxID: 2315458
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-59
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wv9A01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 54.0 | 3.86e-01 | 92.7% | 76.7% |
| 4aw8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 52.0 | 3.69e-01 | 96.4% | 74.2% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 51.0 | 3.72e-01 | 96.4% | 59.3% |
| 4r8tB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 48.0 | 4.39e-01 | 85.5% | 95.9% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.61 | 44.0 | 4.04e-01 | 80.0% | 81.8% |
| 2x8fA02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 48.0 | 4.08e-01 | 89.1% | 69.5% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 43.0 | 3.57e-01 | 94.5% | 43.1% |
| 2nn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 47.0 | 3.42e-01 | 92.7% | 53.8% |
| 2zxrA01 | 2.40.50.460 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 45.0 | 3.27e-01 | 83.6% | 40.5% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 46.0 | 3.78e-01 | 90.9% | 57.4% |
| 2dx0B01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 46.0 | 4.19e-01 | 90.9% | 74.7% |
| 2oolA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 41.0 | 3.41e-01 | 78.2% | 80.4% |
| 3wewA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 46.0 | 3.17e-01 | 98.2% | 48.9% |
| 2z1cB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 44.0 | 3.99e-01 | 85.5% | 63.5% |
| 3u9sE04 | 3.30.700.40 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.56 | 46.0 | 3.59e-01 | 92.7% | 79.2% |
| 5wy8B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 3.25e-01 | 72.7% | 68.4% |
| 2dx0A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 44.0 | 3.56e-01 | 90.9% | 48.7% |
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 43.0 | 4.18e-01 | 85.5% | 93.7% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 41.0 | 3.26e-01 | 83.6% | 89.0% |
| 4lrzE02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 3.43e-01 | 80.0% | 93.6% |
| 6baoA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 41.0 | 3.13e-01 | 85.5% | 75.5% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 42.0 | 4.07e-01 | 100.0% | 77.4% |
| 2fgtA02 | 3.10.450.310 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 40.0 | 3.60e-01 | 83.6% | 56.1% |
| 5gaeG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.53 | 41.0 | 3.72e-01 | 89.1% | 80.2% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.53 | 44.0 | 3.81e-01 | 94.5% | 75.6% |
| 4bdxA00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.53 | 43.0 | 3.90e-01 | 98.2% | 74.7% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 38.0 | 3.02e-01 | 80.0% | 76.7% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 39.0 | 3.12e-01 | 85.5% | 87.2% |
| 2h9fA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 37.0 | 2.66e-01 | 76.4% | 81.0% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 4.17e-01 | 90.9% | 95.8% |
| 2j8gA03 | 2.20.120.10 | Mainly Beta › Single Sheet › Multimodular pneumococcal cell wall endolysin, domain 3 › Multimodular pneumococcal cell wall endolysin, domain 3 | 0.51 | 39.0 | 3.91e-01 | 92.7% | 94.8% |
| 4i14A02 | 3.40.50.10990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II | 0.51 | 38.0 | 3.13e-01 | 89.1% | 80.2% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.51 | 38.0 | 3.22e-01 | 87.3% | 66.7% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 38.0 | 3.40e-01 | 85.5% | 67.9% |
| 5umbA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 40.0 | 2.96e-01 | 98.2% | 77.9% |
| 6ui4A02 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 39.0 | 2.85e-01 | 85.5% | 72.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2033715 | 3804.1.1.1 ↗ | alpha bundles › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › Cas13a_endoribonuclease | 0.68 | 49.0 | 3.19e-01 | 80.0% | 19.7% |
| 4000205 | 384.1.1.0 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like | 0.65 | 43.0 | 4.47e-01 | 85.5% | 76.0% |
| 4104949 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 51.0 | 4.30e-01 | 98.2% | 88.6% |
| 3715487 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 51.0 | 3.12e-01 | 94.5% | 53.5% |
| 5019514 | 881.2.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like | 0.61 | 42.0 | 3.21e-01 | 74.5% | 35.9% |
| 3213942 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.59 | 50.0 | 3.98e-01 | 92.7% | 70.9% |
| 4017539 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.59 | 43.0 | 2.75e-01 | 83.6% | 22.9% |
| 3230771 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.59 | 45.0 | 3.89e-01 | 85.5% | 78.9% |
| 3970247 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.58 | 46.0 | 3.90e-01 | 98.2% | 80.0% |
| 4940665 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.57 | 46.0 | 4.12e-01 | 92.7% | 75.6% |
| 4960648 | 2.14.1.1 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC | 0.57 | 44.0 | 3.93e-01 | 85.5% | 60.0% |
| 3801304 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 46.0 | 3.49e-01 | 92.7% | 52.1% |
| 5074142 | 2.14.1.0 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like | 0.56 | 43.0 | 3.94e-01 | 85.5% | 62.7% |
| 5002450 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 44.0 | 4.42e-01 | 87.3% | 94.5% |
| 3386763 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 43.0 | 4.15e-01 | 87.3% | 84.6% |
| 4520401 | 2.14.1.1 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC | 0.55 | 42.0 | 3.59e-01 | 85.5% | 50.5% |
| 3599791 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.54 | 40.0 | 2.52e-01 | 83.6% | 16.3% |
| 3717786 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.54 | 40.0 | 2.40e-01 | 85.5% | 27.7% |
| 3706274 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.53 | 36.0 | 2.61e-01 | 72.7% | 38.4% |
| 3587958 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 45.0 | 3.88e-01 | 96.4% | 71.1% |
| 3610290 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 38.0 | 2.34e-01 | 81.8% | 22.0% |
| 5002913 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.51 | 41.0 | 2.99e-01 | 92.7% | 54.7% |
| 4987320 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 42.0 | 4.12e-01 | 94.5% | 93.3% |
| 4937593 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.51 | 41.0 | 2.91e-01 | 98.2% | 84.9% |