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NC_048083.1__YP_009814128.1__HOU38_gp015__00015

Bact-Vir

NC_048083.1__YP_009814128.1__HOU38_gp015__00015

Identity

Accession:
NC_048083 ↗
Kingdom:
phage

Quality

81.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-83
PDB
D2 medium residues 93-150
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xvcA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.62e-01 70.7% 76.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3594815 3345.1.1.0 alpha arrays › MRG domain › MRG domain › MRG domain 0.57 46.0 3.30e-01 93.1% 75.1%
5073392 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.55 40.0 3.43e-01 86.2% 47.4%
5014658 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.52 43.0 2.89e-01 100.0% 37.7%
D3 medium residues 159-206
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17318.8 best DUF5361 60.3 1.70e-16 70.8% 88.9%