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NC_048083.1__YP_009814164.1__HOU38_gp051__00051

Bact-Vir

NC_048083.1__YP_009814164.1__HOU38_gp051__00051

Identity

Accession:
NC_048083 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Getalongvirus› Gordonia_phage_Getalong

TaxID: 2315531

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-77
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.82 51.0 5.57e-01 100.0% 77.2%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 48.0 5.18e-01 100.0% 79.7%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 5.70e-01 100.0% 100.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.72 56.0 4.76e-01 100.0% 52.3%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.64 47.0 4.06e-01 100.0% 51.9%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 46.0 4.82e-01 100.0% 89.1%
1whmA01 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.60 54.0 5.37e-01 100.0% 98.6%
1mv3A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 52.0 5.10e-01 100.0% 93.2%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 4.01e-01 100.0% 70.1%
2arzA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 46.0 3.69e-01 94.3% 80.7%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.56 47.0 4.68e-01 100.0% 93.2%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.55 51.0 4.32e-01 100.0% 73.8%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.54 49.0 4.00e-01 100.0% 56.7%
1ia9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 47.0 3.71e-01 100.0% 91.7%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 43.0 3.33e-01 100.0% 76.9%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 41.0 4.23e-01 100.0% 92.5%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 3.82e-01 98.6% 81.2%
4x30A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 36.0 2.95e-01 98.6% 38.2%
3fnbA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 39.0 2.73e-01 85.7% 43.0%
2pbiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 37.0 3.38e-01 84.3% 83.7%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3251559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 53.0 6.21e-01 100.0% 98.0%
3942573 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 54.0 5.92e-01 100.0% 87.9%
3510786 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.75 51.0 5.33e-01 100.0% 76.9%
3848399 4.8.1.24 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.74 56.0 5.61e-01 100.0% 78.6%
3936885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 50.0 5.16e-01 98.6% 73.8%
3918299 4.1.1.376 ↗ beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.74 54.0 5.49e-01 100.0% 77.1%
3886139 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 53.0 5.54e-01 100.0% 81.5%
3990857 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 44.0 4.77e-01 100.0% 76.7%
3797477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 53.0 5.49e-01 100.0% 93.8%
3935469 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.65 48.0 4.81e-01 100.0% 77.1%
5050320 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.65 44.0 4.30e-01 100.0% 65.3%
3935042 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.64 56.0 4.79e-01 98.6% 60.9%
4944045 4.17.1.2 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.63 43.0 4.37e-01 100.0% 71.4%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.63 43.0 4.62e-01 100.0% 85.0%
4012945 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 53.0 5.23e-01 100.0% 86.7%
5081442 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 42.0 4.20e-01 100.0% 70.0%
3470175 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.62 54.0 5.13e-01 100.0% 82.5%
4971470 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.61 41.0 4.08e-01 100.0% 65.3%
3699364 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 54.0 5.29e-01 100.0% 89.3%
5056826 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.61 42.0 4.31e-01 100.0% 76.9%
3189521 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 55.0 5.12e-01 100.0% 81.2%
3423859 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 56.0 5.10e-01 100.0% 83.3%
509 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 53.0 5.01e-01 100.0% 83.1%
4029263 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 51.0 4.28e-01 100.0% 55.8%
3254881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.66e-01 100.0% 84.0%
3236876 1.1.5.49 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.58 48.0 3.28e-01 94.3% 31.8%
4013406 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 4.76e-01 100.0% 96.0%
3487371 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.56 47.0 4.30e-01 100.0% 70.5%
577 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.56 48.0 3.74e-01 100.0% 43.1%
3555838 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.55 47.0 4.38e-01 100.0% 76.7%
3737980 281.1.1.1 ↗ a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.54 45.0 3.42e-01 98.6% 86.7%
3513169 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.54 40.0 2.75e-01 82.9% 74.2%
3335404 4.1.1.350 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7589 0.53 47.0 3.82e-01 100.0% 78.5%
3967332 4.1.1.181 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1820 0.53 45.0 4.27e-01 100.0% 81.2%
3290978 281.1.1.1 ↗ a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.52 44.0 3.52e-01 100.0% 90.0%
1565067 9.23.1.2 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › Lipocalin_8 0.51 42.0 3.61e-01 95.7% 75.2%