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NC_048086.1__YP_009814627.1__HOU41_gp136__00068
Bact-VirNC_048086.1__YP_009814627.1__HOU41_gp136__00068
Identity
- Accession:
- NC_048086 ↗
- Kingdom:
- phage
Quality
91.8
mean pLDDT
Taxonomy
TaxID: 2315597
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-82
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q87A00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.74 | 61.0 | 4.65e-01 | 92.3% | 95.1% |
| 2j6aA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.73 | 55.0 | 4.07e-01 | 82.7% | 89.7% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.71 | 53.0 | 4.59e-01 | 82.7% | 88.1% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.70 | 58.0 | 4.39e-01 | 92.3% | 38.9% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.70 | 51.0 | 3.64e-01 | 78.8% | 26.8% |
| 2wm1A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 46.0 | 2.83e-01 | 71.2% | 85.2% |
| 4j56E00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.68 | 47.0 | 3.72e-01 | 73.1% | 90.5% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.67 | 55.0 | 4.23e-01 | 90.4% | 42.4% |
| 5j7dC00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.67 | 45.0 | 3.60e-01 | 71.2% | 89.6% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 56.0 | 4.64e-01 | 94.2% | 96.8% |
| 1f1sA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.67 | 48.0 | 4.20e-01 | 78.8% | 70.7% |
| 3vm7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 54.0 | 4.31e-01 | 88.5% | 98.0% |
| 6o15A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 46.0 | 3.02e-01 | 76.9% | 16.7% |
| 2diyA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.65 | 46.0 | 3.62e-01 | 75.0% | 87.4% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 54.0 | 3.67e-01 | 92.3% | 66.9% |
| 1r26A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 45.0 | 3.50e-01 | 73.1% | 81.4% |
| 1vw5A00 | 3.30.70.1420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Structure from the mobile metagenome of cole harbour salt marsh: integron cassette protein hfx_cass1 | 0.63 | 45.0 | 3.30e-01 | 76.9% | 97.4% |
| 4ruvA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 44.0 | 3.54e-01 | 73.1% | 92.5% |
| 3mqgA02 | 2.20.70.110 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.63 | 44.0 | 4.81e-01 | 86.5% | 100.0% |
| 3h3lC00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.61 | 53.0 | 3.49e-01 | 98.1% | 76.2% |
| 6l6jA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 43.0 | 3.16e-01 | 75.0% | 43.4% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.22e-01 | 78.8% | 71.2% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 48.0 | 3.17e-01 | 96.2% | 38.2% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 42.0 | 4.01e-01 | 76.9% | 69.7% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 48.0 | 3.96e-01 | 92.3% | 82.7% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 41.0 | 3.78e-01 | 78.8% | 53.4% |
| 1q7hA01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.59 | 50.0 | 4.69e-01 | 100.0% | 84.6% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 41.0 | 4.23e-01 | 76.9% | 91.5% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 40.0 | 3.77e-01 | 71.2% | 85.7% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 41.0 | 3.67e-01 | 78.8% | 62.0% |
| 3d5pA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.56 | 45.0 | 3.49e-01 | 96.2% | 40.6% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 38.0 | 3.15e-01 | 75.0% | 54.5% |
| 5ykwA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 49.0 | 3.80e-01 | 98.1% | 87.7% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.54 | 39.0 | 3.97e-01 | 78.8% | 78.8% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 37.0 | 3.34e-01 | 78.8% | 64.2% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700776 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.77 | 57.0 | 5.21e-01 | 100.0% | 60.0% |
| 3587732 | 9.6.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Staphostatin › Staphostatin | 0.77 | 68.0 | 5.30e-01 | 100.0% | 50.9% |
| 4965842 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.76 | 54.0 | 3.37e-01 | 75.0% | 15.9% |
| 5013926 | 375.8.1.8 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › CPxCG_zf | 0.76 | 50.0 | 5.56e-01 | 71.2% | 100.0% |
| 2985816 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.76 | 67.0 | 4.86e-01 | 100.0% | 67.1% |
| 4552798 | 3699.1.1.0 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain | 0.75 | 54.0 | 5.95e-01 | 98.1% | 97.5% |
| 5057575 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.75 | 60.0 | 3.70e-01 | 100.0% | 16.1% |
| 3597793 | 5094.1.1.0 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like | 0.75 | 49.0 | 3.55e-01 | 84.6% | 25.9% |
| 146838 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.74 | 61.0 | 4.65e-01 | 92.3% | 95.1% |
| 3230791 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.73 | 52.0 | 4.24e-01 | 76.9% | 77.0% |
| 3479249 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.72 | 64.0 | 3.78e-01 | 100.0% | 33.0% |
| 4981763 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 50.0 | 5.40e-01 | 76.9% | 97.5% |
| 4930465 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.69 | 57.0 | 5.49e-01 | 96.2% | 81.7% |
| None | — | 0.69 | 56.0 | 3.47e-01 | 92.3% | 27.6% | |
| 3170663 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.69 | 62.0 | 3.70e-01 | 100.0% | 31.6% |
| 3941239 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.68 | 58.0 | 3.36e-01 | 96.2% | 21.4% |
| 3599562 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.68 | 59.0 | 5.01e-01 | 96.2% | 58.8% |
| 3256971 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 59.0 | 3.53e-01 | 100.0% | 32.3% |
| 3172856 | 5.1.4.575 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30290 | 0.66 | 58.0 | 3.58e-01 | 96.2% | 36.1% |
| 3460976 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.66 | 56.0 | 3.45e-01 | 98.1% | 36.4% |
| 3938955 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 47.0 | 4.92e-01 | 76.9% | 93.3% |
| 3267885 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.66 | 57.0 | 4.24e-01 | 98.1% | 38.5% |
| 4113536 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.65 | 53.0 | 3.81e-01 | 92.3% | 66.3% |
| 3972476 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.65 | 58.0 | 4.18e-01 | 100.0% | 38.6% |
| 4484797 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.65 | 56.0 | 3.32e-01 | 98.1% | 24.4% |
| 3468658 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 55.0 | 3.43e-01 | 98.1% | 44.3% |
| 4960303 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.65 | 51.0 | 4.28e-01 | 90.4% | 50.5% |
| 3335997 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.64 | 46.0 | 3.49e-01 | 76.9% | 92.3% |
| 3511660 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.64 | 54.0 | 3.14e-01 | 96.2% | 20.4% |
| 3458523 | 5.1.8.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 | 0.64 | 52.0 | 4.11e-01 | 94.2% | 73.0% |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.63 | 56.0 | 3.96e-01 | 98.1% | 54.7% |
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 4.26e-01 | 78.8% | 61.5% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 4.07e-01 | 76.9% | 55.7% |
| 3730307 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 51.0 | 3.13e-01 | 94.2% | 29.6% |
| 3992505 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.63 | 50.0 | 3.22e-01 | 98.1% | 18.0% |
| 3443636 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.63 | 53.0 | 3.28e-01 | 100.0% | 97.4% |
| 4932368 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.62 | 45.0 | 2.90e-01 | 78.8% | 46.8% |
| 4142302 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.62 | 52.0 | 3.22e-01 | 98.1% | 30.4% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 43.0 | 4.16e-01 | 76.9% | 65.0% |
| 3963821 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.62 | 53.0 | 3.42e-01 | 100.0% | 92.4% |
| 3467756 | 331.3.1.25 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PaO | 0.62 | 52.0 | 3.36e-01 | 98.1% | 33.6% |
| 3419181 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.61 | 50.0 | 3.20e-01 | 98.1% | 39.7% |
| 3685044 | 633.23.1.12 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Fig1 | 0.60 | 50.0 | 3.29e-01 | 100.0% | 27.3% |
| 3581955 | 5.1.4.450 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ldl_recept_b | 0.59 | 47.0 | 3.61e-01 | 96.2% | 67.9% |
| 4023386 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 46.0 | 3.12e-01 | 96.2% | 46.3% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 42.0 | 3.61e-01 | 84.6% | 48.2% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 41.0 | 3.53e-01 | 78.8% | 44.4% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 41.0 | 3.55e-01 | 76.9% | 45.9% |
| 3407854 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 41.0 | 3.46e-01 | 78.8% | 42.1% |
| 3879064 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 39.0 | 3.37e-01 | 78.8% | 43.3% |
| 4026957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 40.0 | 3.92e-01 | 76.9% | 66.7% |
| 1140051 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 40.0 | 4.07e-01 | 76.9% | 87.8% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 39.0 | 3.72e-01 | 78.8% | 61.5% |
| 3541241 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.55 | 40.0 | 3.91e-01 | 78.8% | 71.7% |
| 4995814 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.55 | 43.0 | 3.15e-01 | 100.0% | 28.7% |
| 4941159 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 39.0 | 3.17e-01 | 76.9% | 78.1% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 39.0 | 3.69e-01 | 78.8% | 61.5% |
| 3961571 | 3699.1.1.3 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synth | 0.53 | 42.0 | 3.36e-01 | 96.2% | 85.8% |
| 3406803 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.51 | 37.0 | 3.41e-01 | 78.8% | 70.0% |
| 4176398 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.51 | 41.0 | 2.70e-01 | 100.0% | 75.3% |