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NC_048096.1__YP_009815601.1__HOU51_gp51__00051

Bact-Vir

NC_048096.1__YP_009815601.1__HOU51_gp51__00051

Identity

Accession:
NC_048096 ↗
Kingdom:
phage

Quality

85.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-59
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 5.89e-01 100.0% 83.3%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 68.0 6.59e-01 100.0% 98.1%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 5.45e-01 91.7% 80.0%
3h6zA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 65.0 4.96e-01 100.0% 82.1%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 66.0 5.64e-01 100.0% 86.8%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 62.0 6.16e-01 95.8% 100.0%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 6.14e-01 97.9% 87.5%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 4.95e-01 97.9% 52.0%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 65.0 5.35e-01 100.0% 60.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 61.0 5.80e-01 100.0% 98.3%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 64.0 5.86e-01 100.0% 81.0%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 61.0 5.72e-01 100.0% 98.4%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 62.0 5.20e-01 100.0% 57.6%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 5.58e-01 97.9% 76.9%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.59e-01 95.8% 100.0%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.27e-01 97.9% 67.1%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 59.0 4.34e-01 95.8% 40.6%
2k3yA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 4.59e-01 100.0% 78.3%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 5.51e-01 97.9% 81.4%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 4.74e-01 97.9% 49.0%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 58.0 5.49e-01 100.0% 98.4%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 58.0 5.24e-01 100.0% 82.9%
1x05A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 57.0 4.33e-01 100.0% 66.7%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 5.89e-01 97.9% 100.0%
2dfuA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.68 51.0 5.29e-01 100.0% 93.2%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 57.0 4.63e-01 100.0% 58.2%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 57.0 5.07e-01 100.0% 89.2%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 48.0 4.52e-01 91.7% 61.3%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 4.93e-01 97.9% 60.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 56.0 5.27e-01 100.0% 91.9%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 55.0 5.04e-01 97.9% 92.5%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 55.0 5.20e-01 100.0% 93.3%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 4.72e-01 100.0% 76.0%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 51.0 4.87e-01 95.8% 88.7%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 54.0 4.27e-01 100.0% 75.9%
4x8iA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.63 47.0 3.83e-01 79.2% 95.3%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 52.0 4.05e-01 100.0% 80.0%
2fjlA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 47.0 3.46e-01 91.7% 94.7%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.89e-01 100.0% 98.0%
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.57 44.0 3.57e-01 93.8% 44.4%
3eagA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.57 46.0 3.03e-01 93.8% 77.1%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 40.0 2.87e-01 79.2% 23.6%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 41.0 3.28e-01 100.0% 95.6%
4hsrB01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 42.0 2.59e-01 91.7% 83.6%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3930366 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 73.0 6.79e-01 100.0% 91.7%
4665407 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.81 66.0 6.56e-01 100.0% 86.0%
4116754 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.80 63.0 6.52e-01 95.8% 91.1%
3370388 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.80 74.0 6.57e-01 100.0% 89.2%
3821920 4.1.1.283 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2 0.80 71.0 6.80e-01 97.9% 89.1%
3706998 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.47e-01 100.0% 80.0%
3935464 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 71.0 6.57e-01 100.0% 91.7%
3940362 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.79 70.0 4.45e-01 100.0% 24.5%
3323551 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.78 72.0 6.44e-01 100.0% 90.8%
3323558 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.78 68.0 6.30e-01 95.8% 93.3%
4516378 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.78 66.0 5.81e-01 100.0% 64.3%
3302817 4.1.1.362 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.78 69.0 5.27e-01 100.0% 89.0%
4627221 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.77 64.0 5.80e-01 100.0% 67.7%
3245045 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.77 68.0 4.48e-01 100.0% 25.5%
3296864 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.77 68.0 6.30e-01 100.0% 78.3%
3486326 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 66.0 6.37e-01 95.8% 87.3%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 66.0 4.25e-01 97.9% 22.2%
3347851 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.77 66.0 5.80e-01 100.0% 65.7%
3236896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 61.0 5.45e-01 91.7% 81.4%
3679595 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.75 67.0 5.82e-01 100.0% 81.1%
3598271 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 67.0 4.52e-01 100.0% 30.0%
3993250 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.75 67.0 6.43e-01 100.0% 87.3%
3463181 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.67e-01 95.8% 65.7%
3707479 4.1.1.5 beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.75 66.0 4.33e-01 100.0% 26.3%
3783847 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 64.0 5.84e-01 100.0% 92.3%
3510786 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.74 64.0 5.81e-01 97.9% 80.0%
3556321 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.74 66.0 5.56e-01 100.0% 82.5%
5036498 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.74 65.0 5.64e-01 100.0% 66.7%
1144785 3820.1.1.2 a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_C 0.74 63.0 4.98e-01 100.0% 78.3%
147797 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.74 65.0 5.83e-01 100.0% 82.4%
2642957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.45e-01 100.0% 64.2%
1567496 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.73 63.0 5.99e-01 97.9% 89.5%
4023868 4.1.1.24 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.73 64.0 4.47e-01 100.0% 32.9%
4549698 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.73 62.0 5.01e-01 97.9% 62.1%
2527304 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.73 63.0 5.90e-01 100.0% 88.5%
3464886 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 62.0 5.81e-01 97.9% 86.7%
2106277 4.1.1.24 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.72 62.0 4.65e-01 100.0% 40.3%
4024240 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 64.0 5.42e-01 100.0% 71.2%
3936474 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 61.0 4.89e-01 95.8% 51.6%
3768116 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.72 63.0 4.10e-01 100.0% 28.8%
3503981 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 58.0 5.49e-01 91.7% 80.0%
3684646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.33e-01 100.0% 76.2%
3512419 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 61.0 5.12e-01 100.0% 71.8%
3777241 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 4.75e-01 100.0% 49.1%
3471771 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 61.0 5.88e-01 97.9% 89.1%
3263031 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 59.0 5.48e-01 100.0% 73.8%
3931417 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 58.0 5.49e-01 97.9% 98.3%
1503651 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 60.0 5.10e-01 100.0% 68.8%
2561577 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.68 58.0 5.45e-01 100.0% 78.7%
3214234 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.34e-01 100.0% 96.7%
3441142 4.8.1.7 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE 0.66 53.0 5.12e-01 91.7% 96.4%
4953223 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.66 53.0 5.33e-01 100.0% 92.0%
5063311 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.66 51.0 5.23e-01 95.8% 97.8%
4507316 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.64 54.0 4.21e-01 100.0% 70.4%
3997716 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.64 54.0 4.70e-01 97.9% 81.3%
3669028 1129.1.1.1 a+b three layers › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › NDUFA12 0.63 46.0 3.62e-01 79.2% 41.9%
4484533 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 48.0 2.90e-01 89.6% 17.1%
3651779 109.21.1.0 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain 0.60 47.0 2.60e-01 89.6% 8.3%
None 0.60 46.0 2.59e-01 89.6% 8.5%
3322461 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.59 47.0 4.53e-01 100.0% 96.7%
4025611 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 44.0 2.63e-01 91.7% 15.9%
4485741 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.57 44.0 2.47e-01 89.6% 8.9%
3281300 4.1.1.426 beta barrels › SH3 › SH3 › SH3 › PF31188 0.55 45.0 4.19e-01 100.0% 93.8%
3291157 219.1.1.8 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.51 41.0 3.11e-01 100.0% 39.3%
4943564 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.51 41.0 3.59e-01 100.0% 88.2%
3781294 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.49e-01 93.8% 90.1%
D2 high residues 66-127
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1twcA01 4.10.860.120 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › RNA polymerase II, clamp domain 0.96 67.0 5.02e-01 74.2% 34.1%
2fefA01 1.20.1440.70 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › PA2201 N-terminal domain-like 0.93 85.0 6.52e-01 96.8% 48.0%
2ahmG01 6.10.250.2820 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.93 84.0 6.97e-01 95.2% 59.6%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.91 70.0 7.20e-01 96.8% 83.3%
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.91 79.0 7.51e-01 100.0% 81.7%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 83.0 6.91e-01 100.0% 61.8%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.90 75.0 7.34e-01 100.0% 82.1%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.90 78.0 5.84e-01 100.0% 41.1%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 77.0 7.32e-01 100.0% 79.5%
3dkqA02 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.88 63.0 7.17e-01 77.4% 97.9%
3m7gA02 1.10.8.1010 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.88 69.0 5.94e-01 95.2% 54.7%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.88 81.0 6.18e-01 100.0% 51.9%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.87 74.0 7.27e-01 95.2% 86.6%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.86 74.0 7.11e-01 93.5% 84.5%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 70.0 7.06e-01 100.0% 88.7%
5lbmA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.85 76.0 6.85e-01 100.0% 73.5%
3l9fA02 6.10.140.1570 Special › Helix non-globular › Helix Hairpins › 0.85 68.0 6.22e-01 87.1% 67.9%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.84 75.0 6.72e-01 100.0% 74.1%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 73.0 6.84e-01 98.4% 80.3%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 65.0 4.56e-01 87.1% 28.5%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.83 67.0 6.07e-01 96.8% 65.1%
2dw4A03 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.82 75.0 6.29e-01 100.0% 64.4%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.82 72.0 6.72e-01 98.4% 79.5%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.82 60.0 6.58e-01 77.4% 100.0%
2jdiG01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.81 71.0 7.18e-01 98.4% 100.0%
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 69.0 6.93e-01 95.2% 96.8%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 69.0 6.12e-01 100.0% 66.3%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.79 70.0 6.51e-01 100.0% 81.0%
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.79 72.0 6.39e-01 100.0% 73.3%
4adzA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.79 70.0 6.22e-01 100.0% 71.1%
2kwhA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 54.0 5.71e-01 100.0% 80.4%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.79 69.0 5.25e-01 100.0% 44.8%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.78 68.0 5.86e-01 98.4% 64.3%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.78 67.0 5.55e-01 100.0% 53.5%
1x04A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.78 69.0 4.79e-01 100.0% 33.0%
3zgxA02 6.10.140.1720 Special › Helix non-globular › Helix Hairpins › 0.77 67.0 5.96e-01 100.0% 68.1%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.77 63.0 6.44e-01 90.3% 96.6%
3gnlB02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 56.0 5.52e-01 80.6% 73.5%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 64.0 6.24e-01 95.2% 86.8%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.75 58.0 5.90e-01 91.9% 89.8%
7qx4A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.75 64.0 4.38e-01 100.0% 26.9%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.74 53.0 5.85e-01 77.4% 97.9%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 61.0 6.14e-01 91.9% 91.9%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.74 56.0 5.75e-01 88.7% 88.1%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 63.0 5.19e-01 100.0% 53.3%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.74 58.0 5.70e-01 87.1% 81.8%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.73 63.0 5.98e-01 100.0% 82.7%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.73 59.0 5.16e-01 91.9% 100.0%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.73 60.0 6.04e-01 93.5% 92.2%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.72 63.0 5.15e-01 100.0% 56.4%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.72 64.0 5.33e-01 100.0% 85.3%
1xdpA01 1.20.58.310 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Polyphosphate kinase N-terminal domain 0.72 59.0 5.08e-01 100.0% 56.2%
6yz2A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.72 61.0 4.98e-01 96.8% 52.5%
3pjaJ01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.71 57.0 4.59e-01 98.4% 43.5%
1qgtB00 1.10.4090.10 Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus 0.71 60.0 4.71e-01 100.0% 64.3%
2xzmO02 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.70 54.0 5.26e-01 85.5% 75.7%
4a64A01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.70 59.0 4.62e-01 93.5% 68.9%
3h1nA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.69 58.0 4.77e-01 96.8% 56.7%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.68 58.0 4.60e-01 93.5% 50.0%
7s0rB01 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.68 52.0 4.93e-01 83.9% 68.4%
4toiA02 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.65 47.0 5.17e-01 77.4% 97.9%
2vkzA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.62 56.0 3.65e-01 100.0% 27.9%
2uv8A07 6.10.140.1410 Special › Helix non-globular › Helix Hairpins › 0.61 56.0 5.00e-01 100.0% 76.5%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3503849 4177.1.1.10 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH 0.98 93.0 5.74e-01 100.0% 21.0%
4286404 3755.1.1.14 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › T3SSipB 0.96 91.0 6.27e-01 100.0% 34.4%
3782889 4177.1.1.5 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 0.96 91.0 5.97e-01 100.0% 28.8%
3326008 5086.1.1.96 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF632 0.95 89.0 7.39e-01 100.0% 62.0%
3682989 5086.1.1.96 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF632 0.95 89.0 6.51e-01 100.0% 42.8%
3683632 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.94 89.0 5.99e-01 100.0% 31.8%
3423402 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.94 89.0 7.84e-01 100.0% 72.9%
3834594 601.27.1.4 alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like › DUF632, DUF630 0.94 88.0 6.34e-01 100.0% 40.0%
3339157 3755.3.1.370 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF632 0.93 86.0 6.93e-01 100.0% 56.4%
3304475 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.92 86.0 4.97e-01 100.0% 13.5%
3814372 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.92 85.0 7.02e-01 100.0% 59.0%
3392286 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.92 86.0 6.91e-01 100.0% 56.4%
4026926 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.92 86.0 6.46e-01 100.0% 45.9%
3397793 616.1.1.2 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › WHEP-TRS 0.92 75.0 7.96e-01 85.5% 96.4%
4249486 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.92 84.0 5.44e-01 100.0% 25.4%
3738569 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.92 84.0 6.89e-01 100.0% 58.1%
4806319 3755.1.1.2 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › YscO-like 0.92 85.0 7.61e-01 100.0% 74.7%
3976632 3291.1.1.4 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 0.91 84.0 6.17e-01 100.0% 41.3%
3705783 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.91 83.0 7.18e-01 98.4% 67.8%
3399433 3826.1.1.39 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › WHEP-TRS 0.91 79.0 7.54e-01 91.9% 81.4%
4934444 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.89 76.0 7.28e-01 91.9% 91.4%
3403179 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.89 81.0 6.72e-01 100.0% 59.0%
4061849 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.89 80.0 6.55e-01 100.0% 56.4%
3389693 192.1.1.0 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.88 79.0 6.00e-01 96.8% 61.5%
3278037 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.88 76.0 5.25e-01 95.2% 30.3%
4984240 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.87 80.0 4.56e-01 100.0% 10.9%
3575095 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.87 72.0 7.09e-01 87.1% 84.6%
3916884 192.29.1.1 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.87 71.0 7.06e-01 88.7% 84.6%
3309382 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.87 78.0 4.86e-01 100.0% 19.4%
3191420 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.87 71.0 7.03e-01 88.7% 84.6%
3682710 2004.1.1.529 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 0.86 76.0 4.43e-01 100.0% 12.7%
3386373 605.1.1.2 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim 0.86 71.0 7.00e-01 88.7% 84.6%
3838316 3567.1.1.150 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › H-kinase_dim 0.86 72.0 6.71e-01 90.3% 74.7%
3408532 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.85 78.0 5.56e-01 100.0% 36.5%
4554324 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.85 76.0 6.45e-01 100.0% 63.0%
2546344 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.84 71.0 7.25e-01 91.9% 95.0%
3089113 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.84 75.0 6.56e-01 100.0% 67.7%
3491310 3826.1.1.67 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Med10 0.84 71.0 6.61e-01 91.9% 74.7%
4543996 3600.1.1.1 alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › YlqD 0.84 73.0 6.10e-01 100.0% 57.1%
4999868 604.1.1.264 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Oxidored_q2 0.84 68.0 6.00e-01 88.7% 61.1%
3954762 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.83 75.0 6.74e-01 98.4% 77.4%
3660125 3711.1.1.4 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DOG1 0.83 71.0 6.34e-01 93.5% 68.2%
4528712 109.4.1.3083 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29810 0.82 74.0 4.77e-01 100.0% 25.9%
3976486 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.82 73.0 6.46e-01 100.0% 70.0%
4951559 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.81 70.0 6.55e-01 95.2% 80.0%
5052725 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.80 65.0 6.30e-01 88.7% 78.6%
4042007 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.80 69.0 5.79e-01 100.0% 60.0%
4613072 101.1.2.721 alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27113 0.79 69.0 5.10e-01 100.0% 37.6%
4175087 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.79 69.0 5.76e-01 100.0% 60.0%
4953534 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.79 71.0 6.40e-01 100.0% 74.1%
3685099 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.79 66.0 6.51e-01 93.5% 89.2%
3611289 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.79 69.0 5.29e-01 100.0% 55.2%
4273807 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.78 68.0 4.08e-01 100.0% 15.7%
1954342 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.78 70.0 6.20e-01 100.0% 70.8%
4115372 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.78 68.0 5.64e-01 100.0% 55.5%
3950461 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.77 69.0 5.88e-01 100.0% 64.0%
3635333 192.15.1.46 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Ribophorin_II_C 0.75 64.0 5.32e-01 98.4% 55.7%
3948731 192.10.1.1 alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › DksA_N 0.74 66.0 5.31e-01 100.0% 51.7%
2833339 3826.1.1.1 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal 0.73 65.0 5.95e-01 100.0% 75.9%
5014863 3755.3.1.524 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › AI-2E_transport 0.72 65.0 4.12e-01 100.0% 20.0%
3705725 4006.1.1.0 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain 0.69 58.0 4.71e-01 98.4% 47.7%
3746549 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 57.0 4.58e-01 100.0% 47.2%