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NC_048098.1__YP_009815696.1__HOU53_gp10__00010

Bact-Vir

NC_048098.1__YP_009815696.1__HOU53_gp10__00010

Identity

Accession:
NC_048098 ↗
Kingdom:
phage

Quality

77.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Andrewvirus› Arthrobacter_phage_Andrew

TaxID: 2419946

Cluster

View cluster (247 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-110
PDB
Domain cluster: rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.79 47.0 5.97e-01 99.0% 98.4%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.73 65.0 6.69e-01 97.1% 100.0%
3qzqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 45.0 5.36e-01 100.0% 92.8%
2kz4A00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.72 67.0 6.48e-01 100.0% 90.2%
6ku8A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 44.0 5.20e-01 100.0% 94.2%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.70 52.0 5.78e-01 99.0% 100.0%
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.67 62.0 5.99e-01 100.0% 92.2%
2kcaA00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.65 56.0 5.52e-01 100.0% 89.9%
1y7xA01 2.30.30.550 Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat 0.53 24.0 3.38e-01 71.8% 93.6%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.52 35.0 3.69e-01 71.8% 78.7%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 46.0 3.74e-01 100.0% 65.2%
1bdyA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 39.0 3.75e-01 100.0% 68.3%
3lvtA05 2.60.40.2220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 35.0 3.97e-01 99.0% 96.1%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 46.0 3.82e-01 100.0% 95.0%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003311 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 68.0 6.68e-01 100.0% 97.3%
4669352 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 60.0 5.94e-01 100.0% 84.5%
3943285 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 64.0 6.34e-01 100.0% 97.2%
3587815 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 61.0 6.07e-01 100.0% 93.3%
169594 1.1.13.14 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 0.67 62.0 5.99e-01 100.0% 92.2%
3511361 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 43.0 5.07e-01 70.9% 100.0%
4988096 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.63 58.0 5.64e-01 100.0% 97.4%
5060700 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.61 42.0 3.62e-01 72.8% 97.6%
3783835 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.60 51.0 3.86e-01 95.1% 79.2%
3796583 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 39.0 3.56e-01 99.0% 51.4%
3171619 11.1.1.643 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 0.58 34.0 3.65e-01 73.8% 65.6%
3575472 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 39.0 3.82e-01 99.0% 65.1%
4260208 1.1.13.62 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 0.57 51.0 5.10e-01 97.1% 100.0%
3740297 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.54 38.0 3.10e-01 72.8% 100.0%
5034239 10.1.2.200 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF7901 0.54 42.0 3.49e-01 85.4% 70.8%
3230604 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.54 47.0 3.57e-01 100.0% 87.0%
5050037 1.1.2.16 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD 0.54 48.0 4.59e-01 100.0% 90.0%
3573640 11.2.1.16 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PKC_C2 0.53 40.0 3.81e-01 100.0% 66.4%
3220044 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.93e-01 83.5% 82.1%
3489664 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 36.0 3.42e-01 70.9% 69.2%
3576746 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.51 43.0 3.62e-01 94.2% 90.8%
3381129 1.1.5.34 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_oxidase_2 0.50 45.0 3.86e-01 100.0% 68.8%