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NC_048102.1__YP_009815994.1__HOU57_gp028__00028

Bact-Vir

Identity

Accession:: NC_048102 ↗
Kingdom:: phage

Quality

92.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Leucotheavirus› Synechococcus_phage_S-P4

TaxID: 2484640

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-47

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2gs4A00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.81	69.0	4.50e-01	100.0%	23.4%
3k1hA00	3.30.1120.180	Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076	0.80	68.0	4.92e-01	100.0%	80.0%
2gtsA00	1.10.287.850	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain	0.74	64.0	5.15e-01	100.0%	55.8%
2guzB00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.70	59.0	5.04e-01	97.4%	61.5%
4nv0A02	1.10.150.340	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain	0.67	56.0	4.52e-01	100.0%	51.2%
2w3cA02	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.66	52.0	3.15e-01	100.0%	12.6%
3tufA00	1.10.287.4300	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like	0.63	54.0	3.79e-01	97.4%	32.2%
6t4hA03	1.10.3060.10	Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA	0.60	51.0	3.32e-01	97.4%	41.9%
3hsqA02	1.20.1180.10	Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain	0.60	47.0	3.93e-01	87.2%	55.9%
2lfhA00	4.10.280.10	Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain	0.59	42.0	3.51e-01	89.7%	44.1%
4ap9A02	1.10.150.210	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2	0.55	39.0	3.59e-01	92.3%	56.7%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3686421	616.1.1.0 ↗	alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain	0.78	67.0	5.09e-01	100.0%	42.2%
4795626	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.76	65.0	3.87e-01	100.0%	21.3%
4156290	192.6.1.0 ↗	alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain	0.74	62.0	6.02e-01	100.0%	86.7%
3807618	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.72	61.0	5.54e-01	100.0%	85.5%
4100982	101.1.2.281 ↗	alpha arrays › HTH › HTH › winged helix domain › Tfb2	0.72	53.0	4.25e-01	84.6%	40.0%
3456759	3826.1.1.0 ↗	alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR)	0.70	60.0	4.83e-01	100.0%	70.0%
3737296	192.2.1.18 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING	0.62	49.0	3.64e-01	100.0%	33.1%
4945318	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.59	52.0	3.72e-01	100.0%	41.7%
4066690	633.12.1.0 ↗	alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like	0.57	47.0	3.49e-01	92.3%	37.0%