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NC_048111.1__YP_009816869.1__HOU66_gp48__00048

Bact-Vir

NC_048111.1__YP_009816869.1__HOU66_gp48__00048

Identity

Accession:
NC_048111 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 30-87
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nimA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 55.0 3.69e-01 89.7% 54.2%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.68 55.0 5.58e-01 93.1% 100.0%
5fydB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 56.0 3.71e-01 93.1% 52.0%
2lfhA00 4.10.280.10 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain 0.58 31.0 2.96e-01 91.4% 41.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4645454 1008.1.1.109 alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › Pex2_Pex12 0.76 67.0 5.75e-01 96.6% 85.6%
3646869 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.72 59.0 3.64e-01 91.4% 19.1%
3578256 5055.1.1.0 extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel 0.70 58.0 5.51e-01 93.1% 94.3%
3591955 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 59.0 3.28e-01 93.1% 10.3%
4012651 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.65 54.0 3.86e-01 93.1% 44.0%
3483975 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.62 53.0 3.34e-01 96.6% 50.8%