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NC_048120.1__YP_009817338.1__HOU75_gp18__00018
Bact-VirNC_048120.1__YP_009817338.1__HOU75_gp18__00018
Identity
- Accession:
- NC_048120 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Phimunavirus›
Pectobacterium_phage_Zenivior
TaxID: 2489635
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-89
Domain cluster:
rep: ON602723.1__UVX28986.1__A1p_00054__00054__D3-97
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 41.0 | 1.60e-10 | 38.1% | 73.9% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.74 | 69.0 | 6.36e-01 | 100.0% | 80.2% |
| 1v5rA00 | 3.30.920.20 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Gas2-like domain | 0.57 | 37.0 | 3.59e-01 | 71.4% | 57.7% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 27.0 | 3.13e-01 | 95.2% | 65.5% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 29.0 | 3.53e-01 | 84.5% | 95.7% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 26.0 | 3.24e-01 | 90.5% | 83.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965202 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.85 | 79.0 | 7.13e-01 | 100.0% | 86.4% |
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.75 | 70.0 | 6.21e-01 | 100.0% | 84.3% |
| 4112791 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.58 | 30.0 | 3.73e-01 | 90.5% | 84.0% |
| 4278911 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.56 | 30.0 | 3.71e-01 | 90.5% | 86.0% |
| 3967510 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.54 | 33.0 | 3.57e-01 | 76.2% | 72.9% |
| 1870422 | 4337.1.1.0 ↗ | a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain | 0.54 | 27.0 | 3.29e-01 | 94.0% | 80.4% |
| 4881660 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.54 | 25.0 | 3.33e-01 | 86.9% | 87.5% |
| 2388307 | 4.16.1.1 ↗ | beta barrels › SH3 › PhtA domain-like › PhtA domain-like › Strep_his_triad | 0.54 | 30.0 | 3.17e-01 | 72.6% | 59.2% |
| 3164374 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.54 | 28.0 | 3.40e-01 | 91.7% | 80.0% |
| 2858693 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.54 | 27.0 | 3.35e-01 | 98.8% | 79.6% |
| 3964033 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.52 | 27.0 | 3.24e-01 | 91.7% | 78.0% |
| 3988577 | 4.16.1.1 ↗ | beta barrels › SH3 › PhtA domain-like › PhtA domain-like › Strep_his_triad | 0.51 | 28.0 | 3.12e-01 | 70.2% | 68.3% |