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NC_048125.1__YP_009817729.1__HOU80_gp58__00044

Bact-Vir

Identity

Accession:: NC_048125 ↗
Kingdom:: phage

Quality

72.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Mukerjeevirus› Vibrio_phage_1.261.O._10N.286.51.A7

TaxID: 1881237

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 208-293

PDB

Domain cluster: rep: KR052142.1__AKH49523.1__vB_PaeP_fi6_080__00080__D107-209

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l09A01	1.10.8.550	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B	0.68	40.0	4.94e-01	72.1%	98.1%
4cc9B00	1.20.5.4730	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.62	43.0	4.12e-01	70.9%	75.5%
2a6hF01	1.20.120.1810	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.57	48.0	3.85e-01	96.5%	98.4%
3nbiA01	1.10.8.1020	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain	0.57	36.0	4.17e-01	80.2%	96.6%
5b1hA01	3.40.50.1100	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.55	43.0	3.30e-01	89.5%	36.0%
1f68A00	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.54	38.0	3.64e-01	73.3%	86.4%
3t69A02	3.30.420.310	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain	0.54	41.0	3.07e-01	82.6%	39.8%
3lynB00	1.20.150.10	Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein	0.53	41.0	3.69e-01	83.7%	75.8%
2bhsB01	3.40.50.1100	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.51	39.0	3.13e-01	89.5%	40.7%
1v71A01	3.40.50.1100	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.51	42.0	3.15e-01	90.7%	38.0%
6fakA02	1.10.246.10	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 ›	0.50	33.0	3.46e-01	81.4%	72.8%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3586071	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.61	52.0	5.02e-01	100.0%	95.0%
5029464	142.1.1.0 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors	0.59	43.0	4.47e-01	83.7%	83.7%
3323147	148.1.1.52 ↗	alpha arrays › Histone-like › Histone-related › Histone › PF27748	0.57	31.0	3.77e-01	73.3%	89.8%
3994861	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.57	40.0	3.22e-01	73.3%	45.9%
5031795	109.3.1.483 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF2070	0.56	47.0	3.50e-01	97.7%	48.2%
1148121	2484.1.1.46 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DGOK	0.54	41.0	3.33e-01	82.6%	52.9%
3825200	181.1.1.0 ↗	alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins	0.52	37.0	3.64e-01	77.9%	67.4%
3315324	148.1.1.0 ↗	alpha arrays › Histone-like › Histone-related › Histone	0.52	43.0	3.91e-01	91.9%	80.0%
3228717	103.4.1.1 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX	0.50	38.0	4.03e-01	81.4%	96.0%