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NC_048125.1__YP_009817746.1__HOU80_gp41__00061
Bact-VirNC_048125.1__YP_009817746.1__HOU80_gp41__00061
Identity
- Accession:
- NC_048125 ↗
- Kingdom:
- phage
Quality
81.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Mukerjeevirus›
Vibrio_phage_1.261.O._10N.286.51.A7
TaxID: 1881237
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-187
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20030.6 best | bpMoxR | 29.7 | 4.80e-07 | 95.8% | 67.3% |
| PF07728.21 | AAA_5 | 37.3 | 3.70e-09 | 85.1% | 71.9% |
D2
high
residues 191-287
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y88A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.77 | 45.0 | 5.57e-01 | 86.6% | 94.9% |
| 3osnA03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.76 | 43.0 | 4.80e-01 | 85.6% | 71.4% |
| 4q45A03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.73 | 41.0 | 5.24e-01 | 84.5% | 98.2% |
| 4dezA03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.72 | 41.0 | 4.73e-01 | 84.5% | 76.4% |
| 2zj8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.72 | 42.0 | 5.29e-01 | 85.6% | 100.0% |
| 2i1qA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.71 | 42.0 | 5.07e-01 | 84.5% | 91.9% |
| 1z1vA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.70 | 47.0 | 5.36e-01 | 88.7% | 94.3% |
| 5kfzA03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.69 | 39.0 | 4.83e-01 | 83.5% | 93.1% |
| 1u9lB00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.68 | 43.0 | 5.01e-01 | 90.7% | 90.0% |
| 4nj8A01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.68 | 40.0 | 4.93e-01 | 84.5% | 100.0% |
| 6qwvH02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.68 | 41.0 | 4.99e-01 | 82.5% | 100.0% |
| 1doqA00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.64 | 38.0 | 4.34e-01 | 87.6% | 82.6% |
| 1mpgA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.63 | 48.0 | 4.54e-01 | 86.6% | 66.9% |
| 2jhjA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.61 | 50.0 | 4.65e-01 | 95.9% | 70.0% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.57 | 43.0 | 4.42e-01 | 88.7% | 85.6% |
| 3hzjA03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.54 | 41.0 | 3.65e-01 | 82.5% | 65.8% |
| 1wloA00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.53 | 46.0 | 4.15e-01 | 94.8% | 77.9% |
| 1x3aA00 | 1.10.3970.10 | Mainly Alpha › Orthogonal Bundle › BSD domain-like fold › BSD domain | 0.53 | 30.0 | 3.02e-01 | 88.7% | 50.0% |
| 3f1xA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.53 | 44.0 | 3.91e-01 | 92.8% | 89.9% |
| 2kkpA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.53 | 41.0 | 3.93e-01 | 88.7% | 70.9% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.52 | 45.0 | 3.99e-01 | 96.9% | 86.8% |
| 4zpxA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 38.0 | 3.89e-01 | 83.5% | 82.6% |
| 1u6zA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.51 | 44.0 | 3.69e-01 | 100.0% | 93.9% |
| 1kn1B00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.51 | 40.0 | 3.49e-01 | 88.7% | 54.7% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.51 | 44.0 | 3.95e-01 | 97.9% | 85.5% |
| 5cr4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 38.0 | 2.95e-01 | 80.4% | 71.4% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928512 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.79 | 35.0 | 5.23e-01 | 86.6% | 100.0% |
| 4989822 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.77 | 43.0 | 5.57e-01 | 83.5% | 98.2% |
| 4937419 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.77 | 43.0 | 5.59e-01 | 85.6% | 98.2% |
| None | — | 0.77 | 43.0 | 5.18e-01 | 84.5% | 83.1% | |
| 4365785 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.76 | 42.0 | 5.48e-01 | 82.5% | 96.4% |
| 1170597 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.76 | 47.0 | 5.00e-01 | 88.7% | 70.9% |
| 3390495 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 42.0 | 5.25e-01 | 84.5% | 90.0% |
| 3914695 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.75 | 42.0 | 5.05e-01 | 84.5% | 83.1% |
| 1088141 | 102.1.1.23 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH | 0.75 | 42.0 | 5.14e-01 | 84.5% | 85.9% |
| 4942883 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 42.0 | 5.42e-01 | 86.6% | 100.0% |
| 4311398 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.74 | 42.0 | 5.25e-01 | 84.5% | 91.7% |
| 3686061 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.73 | 42.0 | 5.18e-01 | 84.5% | 91.7% |
| 4949724 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 49.0 | 5.69e-01 | 86.6% | 95.7% |
| 364538 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.73 | 41.0 | 4.90e-01 | 84.5% | 81.8% |
| 3626675 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.73 | 43.0 | 5.24e-01 | 84.5% | 93.3% |
| 4952232 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.73 | 46.0 | 5.41e-01 | 93.8% | 93.8% |
| None | — | 0.73 | 44.0 | 5.46e-01 | 86.6% | 98.3% | |
| 5035235 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 46.0 | 5.25e-01 | 90.7% | 87.1% |
| 3736644 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 51.0 | 5.68e-01 | 90.7% | 93.3% |
| 4964212 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 44.0 | 5.04e-01 | 86.6% | 82.9% |
| 3484092 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 41.0 | 4.98e-01 | 84.5% | 84.6% |
| 5081275 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 46.0 | 5.45e-01 | 90.7% | 95.4% |
| 4597170 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.72 | 43.0 | 4.98e-01 | 86.6% | 82.9% |
| 3883598 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 50.0 | 5.73e-01 | 89.7% | 100.0% |
| 5050871 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.72 | 44.0 | 5.26e-01 | 86.6% | 93.7% |
| 4940020 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.72 | 44.0 | 4.59e-01 | 86.6% | 66.3% |
| None | — | 0.71 | 40.0 | 4.94e-01 | 84.5% | 90.0% | |
| 5018343 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.71 | 40.0 | 4.94e-01 | 84.5% | 90.0% |
| 3668692 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.71 | 41.0 | 4.79e-01 | 84.5% | 83.1% |
| None | — | 0.71 | 40.0 | 5.03e-01 | 84.5% | 96.4% | |
| 5073600 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.71 | 44.0 | 5.33e-01 | 89.7% | 100.0% |
| 4086283 | 102.1.1.23 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH | 0.71 | 40.0 | 4.51e-01 | 85.6% | 72.0% |
| 4240528 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.71 | 41.0 | 4.83e-01 | 84.5% | 84.6% |
| 4275102 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.71 | 45.0 | 5.37e-01 | 93.8% | 96.9% |
| 3701318 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.71 | 43.0 | 5.28e-01 | 88.7% | 100.0% |
| 4410212 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.70 | 40.0 | 4.49e-01 | 85.6% | 72.0% |
| None | — | 0.70 | 39.0 | 4.71e-01 | 83.5% | 86.7% | |
| 3960638 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.70 | 40.0 | 4.78e-01 | 84.5% | 84.6% |
| 4946582 | 102.1.1.183 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_C | 0.70 | 38.0 | 4.54e-01 | 83.5% | 80.0% |
| None | — | 0.69 | 40.0 | 4.87e-01 | 84.5% | 91.7% | |
| 4065282 | 102.1.1.23 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH | 0.69 | 39.0 | 4.72e-01 | 84.5% | 88.3% |
| 3962227 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.69 | 40.0 | 4.56e-01 | 84.5% | 78.6% |
| 3264353 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 45.0 | 5.34e-01 | 87.6% | 100.0% |
| 3085369 | 102.1.1.179 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_XRCC3_RpoA | 0.69 | 39.0 | 4.77e-01 | 85.6% | 88.7% |
| 5022597 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.68 | 41.0 | 4.84e-01 | 86.6% | 89.2% |
| 5023028 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.68 | 42.0 | 5.11e-01 | 83.5% | 100.0% |
| 3962761 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 43.0 | 4.78e-01 | 85.6% | 81.3% |
| 3738896 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 41.0 | 4.62e-01 | 86.6% | 81.4% |
| 4970097 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 38.0 | 4.63e-01 | 84.5% | 88.3% |
| 4228098 | 102.1.1.23 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH | 0.68 | 38.0 | 4.36e-01 | 84.5% | 75.7% |
| 4363302 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 38.0 | 4.58e-01 | 83.5% | 86.7% |
| 4420914 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 38.0 | 4.61e-01 | 84.5% | 88.3% |
| 4680280 | 102.1.1.33 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_3 | 0.67 | 39.0 | 4.45e-01 | 86.6% | 78.6% |
| 3698230 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.66 | 43.0 | 4.86e-01 | 93.8% | 90.0% |
| 3588005 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.66 | 38.0 | 4.35e-01 | 85.6% | 77.1% |
| 4210142 | 102.1.1.51 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH_1 | 0.66 | 38.0 | 4.66e-01 | 85.6% | 91.7% |
| 3708972 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.66 | 38.0 | 4.41e-01 | 84.5% | 80.0% |
| 3895315 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.65 | 42.0 | 4.38e-01 | 88.7% | 71.1% |
| 3976130 | 102.1.1.23 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH | 0.64 | 37.0 | 4.15e-01 | 84.5% | 75.7% |
| 3654005 | 102.1.1.47 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › POLH-Rev1_HhH | 0.64 | 39.0 | 4.29e-01 | 87.6% | 77.3% |
| 4946451 | 102.1.1.182 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 | 0.62 | 43.0 | 4.94e-01 | 86.6% | 100.0% |
| 4963018 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.62 | 36.0 | 4.37e-01 | 83.5% | 100.0% |
| 3281208 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.57 | 35.0 | 3.30e-01 | 71.1% | 48.3% |
| 5032214 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 46.0 | 4.85e-01 | 88.7% | 100.0% |
| 3810921 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.53 | 31.0 | 3.63e-01 | 72.2% | 91.7% |
| 4030492 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.51 | 40.0 | 3.17e-01 | 86.6% | 70.0% |
D3
high
residues 291-353