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NC_048139.1__YP_009818481.1__HOU95_gp122__00045
Bact-VirNC_048139.1__YP_009818481.1__HOU95_gp122__00045
Identity
- Accession:
- NC_048139 ↗
- Kingdom:
- phage
Quality
78.5
mean pLDDT
Taxonomy
TaxID: 2499072
Cluster
View cluster (39 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-146
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 45.0 | 4.73e-01 | 92.1% | 85.0% |
| 5jpnC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 41.0 | 3.70e-01 | 91.2% | 54.8% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 43.0 | 4.43e-01 | 92.1% | 84.7% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.55 | 37.0 | 4.08e-01 | 98.2% | 86.5% |
| 5ds1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 29.0 | 3.20e-01 | 86.0% | 66.3% |
| 1y7pB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 27.0 | 3.18e-01 | 81.6% | 73.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083720 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 41.0 | 4.64e-01 | 87.7% | 95.0% |
| 3587376 | 386.1.1.344 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Arm-DNA-bind_4 | 0.61 | 31.0 | 4.18e-01 | 89.5% | 100.0% |
| 3199457 | 59.1.2.1 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › RNase_H2_suC | 0.60 | 31.0 | 3.49e-01 | 89.5% | 63.3% |
| 3360403 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.59 | 28.0 | 3.92e-01 | 71.9% | 100.0% |
| 5055184 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 31.0 | 3.50e-01 | 96.5% | 67.1% |
| 3604261 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 40.0 | 4.55e-01 | 86.8% | 97.6% |
| 3575578 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 29.0 | 3.65e-01 | 79.8% | 84.6% |
| 3484705 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.55 | 31.0 | 2.89e-01 | 90.4% | 43.6% |
| 3893747 | 2.3.1.2 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NTR | 0.54 | 43.0 | 3.96e-01 | 93.9% | 65.3% |
| 4549698 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.52 | 26.0 | 2.87e-01 | 93.0% | 54.7% |
| 3646089 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.52 | 27.0 | 3.16e-01 | 99.1% | 68.8% |
| 3945393 | 7089.1.1.2 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 | 0.52 | 31.0 | 3.46e-01 | 100.0% | 80.0% |