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NC_048139.1__YP_009818524.1__HOU95_gp079__00088

Bact-Vir

NC_048139.1__YP_009818524.1__HOU95_gp079__00088

Identity

Accession:
NC_048139 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Hiyaavirus› Streptomyces_phage_Hiyaa

TaxID: 2499072

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 170-215
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.78 61.0 6.48e-01 91.3% 100.0%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.75 63.0 4.68e-01 93.5% 41.6%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 62.0 5.63e-01 97.8% 90.5%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.72 54.0 5.05e-01 84.8% 84.7%
1ay9A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.71 58.0 4.48e-01 93.5% 46.3%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 53.0 5.02e-01 87.0% 100.0%
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 4.60e-01 97.8% 93.3%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.67 49.0 4.66e-01 80.4% 66.7%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 50.0 4.49e-01 93.5% 92.0%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 53.0 4.10e-01 93.5% 67.9%
2wcyA02 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.64 45.0 3.80e-01 91.3% 43.8%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 52.0 4.08e-01 93.5% 84.8%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 48.0 4.58e-01 93.5% 98.3%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.62 50.0 3.88e-01 93.5% 49.5%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.62 46.0 4.45e-01 84.8% 96.4%
2a22B00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.62 46.0 3.02e-01 80.4% 90.6%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.43e-01 93.5% 78.8%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 47.0 3.65e-01 93.5% 44.0%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 45.0 3.50e-01 80.4% 54.8%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.05e-01 100.0% 52.9%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.60 50.0 3.86e-01 97.8% 49.5%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 46.0 3.88e-01 95.7% 59.8%
2q18X01 3.10.330.40 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.59 46.0 4.14e-01 91.3% 97.1%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 44.0 3.13e-01 91.3% 84.2%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.58 47.0 3.12e-01 93.5% 37.7%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 3.86e-01 93.5% 82.6%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 47.0 3.61e-01 91.3% 75.0%
3nrlA00 2.40.10.390 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 44.0 4.02e-01 91.3% 61.8%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 3.51e-01 100.0% 69.8%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.57 39.0 3.09e-01 76.1% 65.0%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 44.0 3.80e-01 91.3% 62.4%
1smpI00 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.57 42.0 3.50e-01 89.1% 96.0%
2vbuA01 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.57 48.0 3.55e-01 100.0% 60.8%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.56 47.0 2.92e-01 100.0% 35.3%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 45.0 2.80e-01 93.5% 16.6%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.56 45.0 2.84e-01 100.0% 37.7%
8dc1A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 40.0 2.61e-01 80.4% 97.2%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.32e-01 89.1% 96.0%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.51e-01 100.0% 100.0%
2aehA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.49e-01 97.8% 73.0%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.19e-01 100.0% 57.3%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 4.18e-01 100.0% 98.0%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 40.0 3.07e-01 89.1% 95.6%
3t0pA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.54 43.0 3.06e-01 95.7% 97.1%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 41.0 3.28e-01 84.8% 76.8%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 44.0 3.03e-01 100.0% 65.9%
1wb1A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 40.0 3.24e-01 97.8% 61.5%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 41.0 2.61e-01 100.0% 34.1%
5wfiA01 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.52 39.0 3.11e-01 93.5% 35.5%
7jl1B01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.52 41.0 2.99e-01 95.7% 68.2%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 42.0 3.54e-01 100.0% 56.7%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.51 33.0 3.59e-01 73.9% 81.6%
6l4lA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.51 39.0 3.07e-01 89.1% 94.8%
2qv7A02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 40.0 3.00e-01 100.0% 77.9%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 39.0 2.47e-01 93.5% 35.3%
4p1mB01 3.30.160.880 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain 0.51 33.0 3.41e-01 80.4% 66.7%
2kxtA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.50 38.0 2.80e-01 95.7% 86.9%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.50 41.0 3.30e-01 100.0% 55.1%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.50 39.0 2.94e-01 93.5% 32.1%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971219 11.9.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase 0.78 69.0 4.23e-01 97.8% 84.4%
4367301 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 59.0 5.65e-01 89.1% 96.4%
3578824 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 62.0 4.97e-01 93.5% 50.0%
4369736 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.73 59.0 5.99e-01 93.5% 100.0%
3412178 4184.1.1.1 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.72 59.0 5.26e-01 95.7% 87.0%
4031578 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 61.0 6.01e-01 97.8% 92.0%
4954284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.44e-01 93.5% 76.7%
3927363 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 54.0 5.29e-01 84.8% 98.0%
3222051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 60.0 5.45e-01 100.0% 78.5%
2084721 241.14.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C 0.70 51.0 4.37e-01 80.4% 50.6%
3986735 4.1.1.395 ↗ beta barrels › SH3 › SH3 › SH3 › PF27398 0.69 47.0 5.08e-01 73.9% 97.1%
4010317 4.1.1.395 ↗ beta barrels › SH3 › SH3 › SH3 › PF27398 0.68 57.0 5.20e-01 100.0% 76.9%
3959495 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.67 53.0 4.56e-01 91.3% 61.5%
3305577 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.67 53.0 5.17e-01 97.8% 94.5%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.67 51.0 4.82e-01 91.3% 73.3%
3341084 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.66 57.0 4.51e-01 100.0% 95.0%
3981575 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 50.0 4.80e-01 87.0% 89.1%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 51.0 4.93e-01 93.5% 96.4%
2994196 4.10.1.0 ↗ beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain 0.66 53.0 4.71e-01 91.3% 88.4%
4660084 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 50.0 4.58e-01 93.5% 87.0%
3743052 5.1.4.78 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.64 45.0 2.64e-01 76.1% 91.6%
3570978 4.2.1.3 ↗ beta barrels › SH3 › SAND › SAND › RAMA 0.64 53.0 4.33e-01 95.7% 74.4%
3297150 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 3.98e-01 89.1% 81.0%
3616247 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 46.0 3.69e-01 84.8% 75.5%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.61 49.0 4.29e-01 100.0% 77.5%
5005813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.95e-01 100.0% 92.0%
3217266 11.1.1.532 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 0.61 46.0 3.99e-01 84.8% 90.7%
3254426 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.61 45.0 3.30e-01 82.6% 51.9%
4348606 4.1.1.440 ↗ beta barrels › SH3 › SH3 › SH3 › PF27165 0.61 47.0 4.38e-01 93.5% 84.6%
4620172 11.9.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase 0.61 50.0 3.15e-01 97.8% 97.9%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.72e-01 100.0% 100.0%
3752730 241.10.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 0.60 43.0 3.45e-01 80.4% 60.0%
4940501 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 46.0 4.26e-01 89.1% 78.5%
4965868 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 47.0 4.40e-01 91.3% 82.5%
3547476 5.1.4.267 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF28639 0.60 51.0 3.02e-01 100.0% 73.6%
4972872 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 42.0 4.31e-01 84.8% 100.0%
3361063 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.59 46.0 2.93e-01 91.3% 92.3%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.51e-01 100.0% 100.0%
3697648 5.1.4.267 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF28639 0.58 44.0 2.56e-01 84.8% 16.4%
3234632 389.1.2.9 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › C6 0.58 43.0 3.62e-01 84.8% 95.6%
4178962 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.58 41.0 3.47e-01 76.1% 84.7%
4228935 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.58 40.0 3.38e-01 73.9% 82.2%
4504493 325.1.8.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein 0.58 40.0 3.38e-01 73.9% 51.8%
1606334 4.10.1.0 ↗ beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain 0.58 46.0 4.09e-01 91.3% 95.8%
4946710 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.58 41.0 3.53e-01 80.4% 46.7%
3890165 219.1.1.24 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Herpes_teg_N 0.57 44.0 2.88e-01 84.8% 25.6%
5005032 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 42.0 3.94e-01 93.5% 82.9%
3570861 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.57 48.0 3.18e-01 100.0% 51.4%
3572323 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.56 46.0 2.90e-01 93.5% 84.2%
3609150 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 44.0 2.73e-01 97.8% 43.0%
2770740 4012.3.1.3 ↗ a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 › Cas9_PI2 0.55 44.0 4.04e-01 89.1% 88.3%
3219408 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.55 42.0 2.53e-01 91.3% 45.7%
3914794 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.54 46.0 3.07e-01 100.0% 74.1%
3389028 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.54 43.0 3.21e-01 97.8% 95.3%
4026056 221.1.1.7 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.54 42.0 3.24e-01 93.5% 42.4%
4047862 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.54 37.0 3.15e-01 71.7% 81.2%
3576088 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 41.0 2.49e-01 97.8% 33.3%
3938904 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.51 41.0 3.09e-01 97.8% 70.4%
D2 medium residues 30-101
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pihA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.67 49.0 4.97e-01 91.7% 77.8%
3w42A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.61 49.0 3.61e-01 90.3% 55.8%
4bpuC00 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.61 45.0 2.93e-01 81.9% 62.7%
3o8oA03 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 46.0 3.35e-01 83.3% 30.8%
2ygrA03 3.30.190.20 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain 0.58 48.0 4.14e-01 91.7% 87.8%
3o8oF01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 45.0 3.20e-01 88.9% 27.1%
4oxiA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.57 41.0 2.61e-01 79.2% 42.6%
2ia1A01 3.30.500.20 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains 0.57 42.0 3.64e-01 80.6% 100.0%
2wpwC00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 42.0 2.84e-01 86.1% 79.1%
6hj2A00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.55 41.0 2.77e-01 80.6% 46.7%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 34.0 2.36e-01 98.6% 19.0%
3o8sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 36.0 2.94e-01 70.8% 69.4%
2re3B03 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.52 24.0 3.33e-01 91.7% 100.0%
1o7dD01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.52 45.0 3.07e-01 97.2% 28.4%
2vfkA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.51 43.0 3.12e-01 93.1% 42.9%
2dy1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 39.0 2.70e-01 83.3% 93.5%
3pm9A02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.51 37.0 3.15e-01 77.8% 88.5%
1nfdA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.59e-01 91.7% 71.4%
2gy5A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.57e-01 90.3% 62.6%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039733 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.67 46.0 3.78e-01 72.2% 94.6%
4552974 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.64 48.0 3.38e-01 81.9% 61.7%
4356095 3325.1.1.1 ↗ a+b two layers › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrA_inter 0.62 51.0 4.35e-01 91.7% 87.5%
3204956 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.60 45.0 3.89e-01 98.6% 49.2%
5060910 3325.1.1.1 ↗ a+b two layers › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrA_inter 0.60 50.0 4.08e-01 93.1% 76.3%
4237649 3325.1.1.1 ↗ a+b two layers › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrA_inter 0.59 48.0 4.23e-01 93.1% 85.2%
4977569 3325.1.1.0 ↗ a+b two layers › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA 0.59 49.0 4.00e-01 91.7% 72.9%
3597544 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.59 47.0 4.03e-01 93.1% 80.0%
5060317 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.58 50.0 3.61e-01 98.6% 86.7%
4927074 3325.1.1.1 ↗ a+b two layers › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrB-binding domain of UvrA › UvrA_inter 0.58 48.0 4.08e-01 93.1% 88.8%
4390215 275.1.1.0 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.58 43.0 4.31e-01 87.5% 77.3%
4085259 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.56 42.0 2.88e-01 80.6% 64.5%
3236833 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.53 45.0 3.07e-01 95.8% 25.7%
2323826 4187.2.1.1 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.53 36.0 3.59e-01 79.2% 65.4%
4052768 3675.1.1.0 ↗ a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain 0.53 43.0 3.48e-01 93.1% 99.3%
3262165 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.52 43.0 2.99e-01 100.0% 78.3%
3692641 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.51 44.0 3.00e-01 100.0% 82.7%
4992167 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.51 40.0 2.52e-01 94.4% 37.2%
3783150 11.1.1.871 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26282 0.50 41.0 3.27e-01 93.1% 64.5%