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NC_048147.1__YP_009819199.1__HOV04_gp55__00055
Bact-VirNC_048147.1__YP_009819199.1__HOV04_gp55__00055
Identity
- Accession:
- NC_048147 ↗
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Lindbergviridae›
Carpasinavirus›
Xanthomonas_phage_XcP1
TaxID: 2785027
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-60
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oexA02 | 1.20.140.50 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › alix/aip1 like domains | 0.70 | 62.0 | 4.27e-01 | 100.0% | 86.8% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.66 | 53.0 | 4.46e-01 | 92.9% | 70.6% |
| 1o4xA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 40.0 | 4.11e-01 | 75.0% | 64.8% |
| 3cmnA01 | 1.20.150.30 | Mainly Alpha › Up-down Bundle › Lysin › Zincin-like metallopeptidase, N-terminal domain | 0.59 | 43.0 | 3.41e-01 | 76.8% | 88.9% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 44.0 | 3.99e-01 | 92.9% | 57.5% |
| 1tt5B02 | 1.10.10.520 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | 0.57 | 39.0 | 3.53e-01 | 71.4% | 51.9% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 38.0 | 3.67e-01 | 71.4% | 64.2% |
| 1otrA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.56 | 36.0 | 3.79e-01 | 75.0% | 73.5% |
| 2ld5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 42.0 | 3.98e-01 | 92.9% | 77.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929363 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 60.0 | 4.76e-01 | 94.6% | 46.1% |
| 4957380 | 1076.1.1.4 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease | 0.70 | 63.0 | 3.92e-01 | 100.0% | 39.4% |
| 5028289 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.69 | 60.0 | 3.66e-01 | 96.4% | 16.8% |
| 3443076 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 47.0 | 2.72e-01 | 71.4% | 8.6% |
| 4024409 | 541.1.1.0 ↗ | alpha duplicates or obligate multimers › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit | 0.53 | 35.0 | 3.62e-01 | 71.4% | 72.0% |