Back to structures

NC_048147.1__YP_009819223.1__HOV04_gp79__00079

Bact-Vir

NC_048147.1__YP_009819223.1__HOV04_gp79__00079

Identity

Accession:
NC_048147 ↗
Kingdom:
phage

Quality

76.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-68
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zzeA04 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.80 39.0 3.43e-01 76.5% 33.7%
2qa1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 48.0 3.13e-01 89.7% 19.3%
3nybA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 39.0 3.35e-01 75.0% 95.5%
1kmdA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 34.0 2.94e-01 80.9% 35.9%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4948812 2003.1.2.297 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_dim 0.63 48.0 3.00e-01 100.0% 14.1%
3192949 2003.1.2.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.58 41.0 2.69e-01 91.2% 16.2%
3598363 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 46.0 2.96e-01 100.0% 19.1%
4030194 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 44.0 2.78e-01 100.0% 16.8%
3699766 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.53 43.0 2.80e-01 100.0% 18.0%
3594789 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 43.0 2.77e-01 100.0% 18.0%
3405538 219.1.1.111 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 0.53 41.0 2.74e-01 86.8% 52.2%
3709589 11.10.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.52 41.0 3.04e-01 83.8% 95.4%
3595889 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.52 38.0 3.06e-01 77.9% 70.4%