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NC_048151.1__YP_009819563.1__HOV08_gp046__00041
Bact-VirNC_048151.1__YP_009819563.1__HOV08_gp046__00041
Identity
- Accession:
- NC_048151 ↗
- Kingdom:
- phage
Quality
73.8
mean pLDDT
Taxonomy
TaxID: 2484249
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-54
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 60.0 | 6.38e-01 | 74.0% | 86.4% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 59.0 | 5.40e-01 | 74.0% | 56.1% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.84 | 60.0 | 5.85e-01 | 76.0% | 70.9% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 57.0 | 5.95e-01 | 72.0% | 80.0% |
| 2r7rA08 | 1.20.120.1400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.78 | 55.0 | 4.53e-01 | 74.0% | 61.6% |
| 4jrrB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.76 | 55.0 | 3.70e-01 | 78.0% | 52.7% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 62.0 | 6.13e-01 | 98.0% | 94.4% |
| 1ef4A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 46.0 | 4.49e-01 | 74.0% | 76.4% |
| 5douA01 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.66 | 57.0 | 3.97e-01 | 100.0% | 29.8% |
| 1xriA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.66 | 54.0 | 3.98e-01 | 98.0% | 94.0% |
| 2lmzA00 | 1.10.10.2920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 45.0 | 4.75e-01 | 90.0% | 92.9% |
| 1khyD00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.61 | 44.0 | 3.33e-01 | 82.0% | 89.9% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 52.0 | 3.71e-01 | 100.0% | 38.7% |
| 3nqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.59 | 44.0 | 3.34e-01 | 88.0% | 91.1% |
| 2remB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 40.0 | 2.86e-01 | 76.0% | 52.9% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.57 | 50.0 | 3.62e-01 | 98.0% | 67.7% |
| 2raaA00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.56 | 44.0 | 3.23e-01 | 100.0% | 93.8% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.55 | 38.0 | 2.92e-01 | 78.0% | 66.4% |
| 5tqbB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 44.0 | 2.74e-01 | 100.0% | 51.5% |
| 4ye5A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.51 | 36.0 | 2.62e-01 | 82.0% | 41.1% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 37.0 | 2.47e-01 | 88.0% | 20.7% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945906 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.94 | 67.0 | 7.41e-01 | 74.0% | 92.5% |
| 4941605 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.93 | 66.0 | 7.30e-01 | 74.0% | 92.5% |
| 4261475 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.90 | 64.0 | 6.23e-01 | 74.0% | 70.4% |
| 3590732 | 101.1.1.364 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 | 0.89 | 63.0 | 6.61e-01 | 74.0% | 82.2% |
| 3589502 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.89 | 62.0 | 6.29e-01 | 74.0% | 74.0% |
| 3932988 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 61.0 | 5.96e-01 | 74.0% | 67.3% |
| 4162857 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.86 | 60.0 | 6.06e-01 | 74.0% | 74.0% |
| 3587644 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.84 | 60.0 | 5.68e-01 | 76.0% | 65.0% |
| 3857628 | 101.1.3.29 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N | 0.84 | 59.0 | 5.37e-01 | 74.0% | 56.9% |
| 3589359 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.83 | 58.0 | 6.30e-01 | 74.0% | 92.5% |
| 3925603 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 58.0 | 5.89e-01 | 74.0% | 74.0% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.83 | 58.0 | 5.45e-01 | 74.0% | 61.7% |
| 3287536 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 56.0 | 5.81e-01 | 74.0% | 82.2% |
| 4433598 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.79 | 55.0 | 5.53e-01 | 74.0% | 74.0% |
| 5054427 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.78 | 70.0 | 4.97e-01 | 100.0% | 84.8% |
| 4928270 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.78 | 55.0 | 5.70e-01 | 74.0% | 82.2% |
| 3640035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 54.0 | 4.54e-01 | 74.0% | 43.5% |
| 5004841 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 53.0 | 4.93e-01 | 76.0% | 56.9% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 53.0 | 5.33e-01 | 74.0% | 74.0% |
| 3701286 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.76 | 52.0 | 5.28e-01 | 74.0% | 74.0% |
| 4008322 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.75 | 52.0 | 5.12e-01 | 74.0% | 67.3% |
| 3706139 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 52.0 | 5.25e-01 | 74.0% | 74.0% |
| 4626289 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.75 | 52.0 | 4.80e-01 | 74.0% | 56.9% |
| 4575492 | 101.1.6.14 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_29 | 0.74 | 56.0 | 5.20e-01 | 84.0% | 80.0% |
| 3597464 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 51.0 | 4.85e-01 | 74.0% | 61.7% |
| 4085373 | 101.35.1.21 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF494 | 0.73 | 50.0 | 5.08e-01 | 72.0% | 80.0% |
| 3938462 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 63.0 | 5.39e-01 | 100.0% | 85.0% |
| 3759371 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 61.0 | 5.13e-01 | 100.0% | 84.3% |
| 5034272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 49.0 | 4.13e-01 | 74.0% | 44.7% |
| 4594290 | 3411.1.1.0 ↗ | 0.70 | 52.0 | 5.69e-01 | 84.0% | 100.0% | |
| 5071227 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.69 | 59.0 | 3.63e-01 | 98.0% | 95.0% |
| 3942571 | 101.1.1.198 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › KorB | 0.68 | 57.0 | 5.29e-01 | 96.0% | 93.8% |
| 3920862 | 101.1.1.221 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 | 0.67 | 47.0 | 4.72e-01 | 74.0% | 78.0% |
| 4839189 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.58 | 49.0 | 3.80e-01 | 100.0% | 88.5% |
| 3272177 | 2488.1.1.19 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › PF27710 | 0.57 | 42.0 | 2.78e-01 | 78.0% | 70.0% |