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NC_048151.1__YP_009819606.1__HOV08_gp092__00084

Bact-Vir

Identity

Accession:: NC_048151 ↗
Kingdom:: phage

Quality

90.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Pogseptimavirus› Vibrio_phage_VspSw_1

TaxID: 2484249

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 47-139

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF22885.2 best	DUF7020	27.5	4.50e-06	98.9%	57.8%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fafA00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.58	40.0	4.28e-01	81.7%	84.8%
2kzcA00	1.10.790.20	Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Domain of unknown function DUF1476	0.57	42.0	4.40e-01	88.2%	87.1%
4tr3A00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.56	40.0	3.18e-01	74.2%	70.2%
4gmqA00	1.10.8.840	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain	0.55	42.0	4.24e-01	81.7%	87.0%
3dxiA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.54	45.0	3.23e-01	93.5%	84.6%
1myrA00	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.53	47.0	2.98e-01	100.0%	89.2%
1dnpA02	1.25.40.80	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.52	36.0	3.31e-01	72.0%	61.8%
1eg3A03	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.51	39.0	3.97e-01	82.8%	86.8%
3khkB01	1.20.1260.30	Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain	0.51	42.0	3.61e-01	93.5%	86.8%
3mvcB00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.50	41.0	3.61e-01	94.6%	89.6%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3697375	4953.1.1.0 ↗	beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like	0.60	51.0	4.67e-01	94.6%	78.4%
3692	650.1.1.0 ↗	alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain	0.58	40.0	4.28e-01	81.7%	84.8%
3843701	129.1.1.27 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Speriolin_C	0.57	48.0	4.16e-01	95.7%	57.4%
3215219	371.1.1.0 ↗	few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2	0.54	42.0	4.05e-01	83.9%	85.2%
3441608	101.1.2.386 ↗	alpha arrays › HTH › HTH › winged helix domain › WH_DRP	0.52	41.0	4.17e-01	83.9%	88.9%
3371657	101.1.2.386 ↗	alpha arrays › HTH › HTH › winged helix domain › WH_DRP	0.52	37.0	3.78e-01	84.9%	76.7%
3457837	101.1.2.386 ↗	alpha arrays › HTH › HTH › winged helix domain › WH_DRP	0.51	42.0	3.92e-01	88.2%	86.1%
3420624	101.1.2.386 ↗	alpha arrays › HTH › HTH › winged helix domain › WH_DRP	0.51	39.0	3.79e-01	87.1%	72.4%
3240959	7558.1.1.0 ↗	a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase	0.51	39.0	3.76e-01	83.9%	87.3%
3645078	101.1.2.386 ↗	alpha arrays › HTH › HTH › winged helix domain › WH_DRP	0.50	39.0	3.74e-01	83.9%	72.7%
3483556	5054.1.1.0 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels	0.50	43.0	3.10e-01	93.5%	35.1%