←Back to structures

NC_048151.1__YP_009819667.1__HOV08_gp156__00145

Bact-Vir

NC_048151.1__YP_009819667.1__HOV08_gp156__00145

Identity

Accession:
NC_048151 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Pogseptimavirus› Vibrio_phage_VspSw_1

TaxID: 2484249

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-129
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.57 26.0 3.06e-01 82.4% 57.8%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.55 27.0 2.77e-01 96.6% 44.3%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.55 32.0 3.40e-01 100.0% 64.1%
2vtfA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 25.0 2.84e-01 95.8% 56.0%
3kluA01 3.30.2220.30 Alpha Beta › 2-Layer Sandwich › rbstp2171 › 0.51 40.0 4.15e-01 99.2% 91.8%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 25.0 3.29e-01 87.4% 94.5%
2ob9A00 3.30.2220.20 Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like 0.50 38.0 3.97e-01 100.0% 88.8%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.50 30.0 2.78e-01 82.4% 43.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039151 3103.1.1.0 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN 0.57 45.0 4.79e-01 95.0% 100.0%
3230804 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 27.0 2.99e-01 95.8% 54.4%
4647057 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 31.0 3.31e-01 98.3% 64.8%
3516325 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 28.0 3.33e-01 78.2% 76.2%
1111980 811.1.1.0 ↗ a+b complex topology › Cell cycle regulatory proteins › Cell cycle regulatory proteins › Cell cycle regulatory proteins 0.51 31.0 3.27e-01 98.3% 66.4%
3650063 811.1.1.1 ↗ a+b complex topology › Cell cycle regulatory proteins › Cell cycle regulatory proteins › Cell cycle regulatory proteins › CKS 0.51 28.0 3.38e-01 99.2% 84.0%