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NC_048153.1__YP_009819807.1__HOV10_gp35__00035

Bact-Vir

NC_048153.1__YP_009819807.1__HOV10_gp35__00035

Identity

Accession:
NC_048153 ↗
Kingdom:
phage

Quality

79.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Austintatiousvirus› Streptomyces_phage_Austintatious

TaxID: 2500795

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 82-141_205-230
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 35.0 3.01e-01 83.7% 42.1%
8gpsA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 35.0 3.25e-01 74.4% 53.3%
2uv4A00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 38.0 3.16e-01 74.4% 49.0%
4cooA03 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 37.0 3.13e-01 76.7% 47.4%
2yziB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 38.0 3.23e-01 77.9% 68.1%
3l2bA01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 36.0 3.25e-01 77.9% 53.8%
3ocoA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.50 36.0 3.13e-01 79.1% 47.8%
3ddjA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.50 37.0 3.09e-01 76.7% 65.7%
3pjvD01 3.30.110.200 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.50 34.0 3.54e-01 90.7% 76.9%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4873474 223.3.1.8 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.65 25.0 3.41e-01 87.2% 66.7%
5059208 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.55 39.0 3.12e-01 74.4% 59.1%
7276 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.52 36.0 3.20e-01 77.9% 50.0%
5012110 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.51 37.0 3.17e-01 76.7% 48.5%
5078399 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.51 38.0 3.18e-01 77.9% 70.0%
3242119 4104.1.1.0 ↗ beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like 0.51 38.0 3.63e-01 100.0% 66.7%
4961086 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.51 37.0 2.97e-01 76.7% 75.6%
D2 medium residues 142-204
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w01B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.58 39.0 2.85e-01 71.4% 80.2%
7d4rB01 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.58 40.0 2.81e-01 73.0% 97.6%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.52 37.0 2.74e-01 79.4% 59.5%
4g84A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 37.0 2.38e-01 77.8% 27.9%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 36.0 3.00e-01 88.9% 43.4%
3bjoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.16e-01 77.8% 67.0%
6nifA01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.51 40.0 2.84e-01 87.3% 91.7%
3we0A03 1.10.405.40 Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › 0.50 37.0 2.90e-01 79.4% 84.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3233807 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 44.0 4.24e-01 77.8% 82.9%
3623035 2004.5.1.3 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.57 42.0 2.94e-01 84.1% 91.2%
4057956 2004.1.1.35 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA 0.53 47.0 3.18e-01 100.0% 92.6%
4581803 4041.1.1.1 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.53 38.0 2.75e-01 76.2% 35.9%
3742582 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.52 43.0 3.04e-01 92.1% 100.0%
5014575 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.49e-01 88.9% 70.0%
3237398 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.51 36.0 3.24e-01 79.4% 60.0%