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NC_048154.1__YP_009819850.1__HOV11_gp25__00025

Bact-Vir

Identity

Accession:: NC_048154 ↗
Kingdom:: phage

Quality

91.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Colingsworthviridae› Vashvirus› Streptomyces_phage_Vash

TaxID: 2510568

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-74

PDB

Domain cluster: rep: MN224564.1__QFG07854.1__SEA_ARACELI_40__00040__D1-62

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4e4eA01	1.10.287.990	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain	0.73	54.0	5.38e-01	75.7%	78.9%
4biuE01	1.10.287.130	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain	0.73	55.0	4.92e-01	80.0%	61.2%
1luwA01	1.10.287.990	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain	0.69	48.0	4.99e-01	71.4%	79.7%
4e6nA02	6.10.140.1010	Special › Helix non-globular › Helix Hairpins ›	0.66	47.0	4.83e-01	81.4%	77.3%
3ehfD01	1.20.5.1930	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.65	46.0	4.83e-01	74.3%	82.5%
3emlA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.63	52.0	3.42e-01	90.0%	22.2%
2j7qA00	3.90.70.120	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.57	46.0	3.26e-01	90.0%	71.4%
1x3kA01	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.56	42.0	3.37e-01	81.4%	43.5%
1k07A00	3.60.15.10	Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	0.55	43.0	2.97e-01	88.6%	63.4%
3rosA01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.53	41.0	2.90e-01	90.0%	59.7%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3285585	191.1.1.0 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain	0.85	70.0	5.49e-01	87.1%	46.7%
3279903	191.1.1.0 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain	0.83	67.0	5.45e-01	87.1%	51.2%
3665480	109.4.1.1559 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tic110	0.75	51.0	3.35e-01	70.0%	21.4%
3336677	605.1.1.132 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641	0.73	57.0	5.58e-01	82.9%	77.3%
4286197	605.1.1.1 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA	0.69	52.0	4.98e-01	80.0%	81.2%
5047384	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.69	49.0	5.04e-01	74.3%	81.5%
3315624	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.64	52.0	4.44e-01	87.1%	88.2%
3344575	9.26.1.0 ↗	beta barrels › Lipocalins/Streptavidin	0.64	48.0	3.52e-01	82.9%	34.4%
3696367	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.62	42.0	4.20e-01	71.4%	66.7%
137999	106.1.1.1 ↗	alpha arrays › Globin-like › Globin-like › Globin-like › Globin	0.57	42.0	3.37e-01	81.4%	42.1%