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NC_048154.1__YP_009819861.1__HOV11_gp36__00036

Bact-Vir

NC_048154.1__YP_009819861.1__HOV11_gp36__00036

Identity

Accession:
NC_048154 ↗
Kingdom:
phage

Quality

93.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Colingsworthviridae› Vashvirus› Streptomyces_phage_Vash

TaxID: 2510568

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-55
PDB
Domain cluster: representative
CATH (85)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.81 56.0 4.79e-01 72.2% 47.6%
3zhaQ02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.79 59.0 4.38e-01 79.6% 65.6%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.79 65.0 5.13e-01 90.7% 59.6%
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.77 66.0 6.05e-01 100.0% 85.1%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.75 67.0 4.65e-01 100.0% 80.1%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 53.0 4.07e-01 75.9% 93.5%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.74 65.0 4.87e-01 100.0% 71.3%
2peeB02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.74 57.0 4.28e-01 83.3% 70.2%
2qh9A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.74 59.0 4.08e-01 87.0% 48.9%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.74 60.0 3.64e-01 100.0% 14.2%
1s0wC01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.74 51.0 4.29e-01 72.2% 59.3%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.74 60.0 4.36e-01 98.1% 32.7%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.73 54.0 4.02e-01 77.8% 33.6%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.73 60.0 5.44e-01 92.6% 75.7%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.73 63.0 4.77e-01 98.1% 72.9%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.72 61.0 4.56e-01 92.6% 65.9%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.71 63.0 4.65e-01 100.0% 87.1%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.71 61.0 3.88e-01 100.0% 19.8%
3s9dD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 50.0 4.09e-01 74.1% 76.0%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 57.0 4.61e-01 92.6% 46.8%
3bgtA01 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.70 62.0 4.06e-01 100.0% 82.3%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.70 55.0 4.35e-01 87.0% 68.4%
2ychA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 56.0 4.29e-01 87.0% 94.2%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.69 58.0 4.01e-01 96.3% 42.9%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 55.0 4.70e-01 92.6% 52.6%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 56.0 5.41e-01 90.7% 87.1%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 56.0 4.42e-01 94.4% 43.8%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.68 60.0 3.57e-01 100.0% 60.5%
5eoxB03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 54.0 4.09e-01 87.0% 94.5%
3nuwA01 3.30.420.300 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain 0.68 54.0 4.55e-01 87.0% 90.0%
2mhgA00 2.20.130.30 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 0.68 46.0 4.12e-01 70.4% 52.0%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.68 59.0 4.64e-01 100.0% 87.3%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 58.0 4.42e-01 100.0% 93.2%
2khxA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 49.0 4.31e-01 77.8% 68.4%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.67 59.0 3.52e-01 100.0% 59.3%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 58.0 4.44e-01 100.0% 85.5%
1t6cA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.67 56.0 3.90e-01 94.4% 85.6%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.67 47.0 3.09e-01 75.9% 47.5%
4dokA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.66 55.0 3.99e-01 94.4% 63.2%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.66 46.0 3.09e-01 74.1% 83.9%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.66 57.0 3.51e-01 100.0% 89.1%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 54.0 3.29e-01 90.7% 49.1%
1ti2A01 2.20.25.340 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 42.0 3.97e-01 77.8% 54.5%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.65 55.0 3.43e-01 100.0% 46.2%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 49.0 4.12e-01 83.3% 59.6%
1jcfA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 48.0 4.14e-01 83.3% 92.1%
2nrhB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 49.0 3.63e-01 85.2% 68.1%
1mgpA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.63 50.0 3.98e-01 90.7% 96.7%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.63 55.0 4.26e-01 100.0% 51.2%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 55.0 3.66e-01 100.0% 68.1%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 48.0 3.79e-01 88.9% 82.3%
3mdqA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.63 52.0 3.61e-01 94.4% 85.7%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.63 44.0 2.91e-01 75.9% 45.7%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.62 56.0 3.85e-01 100.0% 56.7%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 48.0 4.01e-01 88.9% 82.7%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 3.94e-01 92.6% 65.0%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 45.0 3.99e-01 83.3% 89.5%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 45.0 3.34e-01 83.3% 33.1%
2bkkA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 42.0 3.52e-01 72.2% 74.4%
1stzA03 3.30.390.60 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Heat-inducible transcription repressor hrca homolog; domain 3 0.61 49.0 4.17e-01 88.9% 55.1%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 45.0 3.53e-01 83.3% 61.4%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.24e-01 100.0% 89.4%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 3.95e-01 100.0% 65.2%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 49.0 3.94e-01 100.0% 94.5%
1qmoE01 2.60.40.4220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 42.0 3.69e-01 74.1% 90.5%
4qq1C03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.60 40.0 3.47e-01 75.9% 43.2%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 3.79e-01 100.0% 58.1%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 49.0 3.79e-01 100.0% 50.0%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.59 45.0 4.24e-01 87.0% 74.6%
2yx6D01 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.59 43.0 3.69e-01 85.2% 80.4%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 49.0 3.51e-01 96.3% 50.9%
1zo0A00 3.40.630.60 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.59 47.0 3.69e-01 92.6% 58.7%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 48.0 4.45e-01 92.6% 90.1%
4b63A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 50.0 2.97e-01 98.1% 39.7%
2e5aA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.58 49.0 4.15e-01 96.3% 80.6%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 46.0 3.79e-01 90.7% 79.8%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 3.73e-01 100.0% 59.7%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.57 39.0 3.14e-01 70.4% 33.6%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 43.0 3.60e-01 85.2% 95.0%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 47.0 3.09e-01 100.0% 48.0%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 40.0 2.93e-01 77.8% 30.4%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 45.0 3.66e-01 100.0% 92.8%
4czuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 40.0 3.50e-01 79.6% 82.6%
3e8lC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 44.0 3.27e-01 100.0% 89.2%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.52 42.0 2.56e-01 98.1% 81.7%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3435691 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.84 57.0 5.30e-01 70.4% 66.2%
3690594 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.83 59.0 3.32e-01 75.9% 7.5%
3975425 3844.1.1.1 ↗ a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.80 71.0 5.64e-01 98.1% 50.5%
3228242 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.79 69.0 5.69e-01 100.0% 81.0%
4032161 809.1.1.0 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.79 56.0 5.30e-01 75.9% 62.5%
3264756 4075.1.1.2 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.79 65.0 5.22e-01 88.9% 86.0%
3255777 4075.1.1.2 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.77 64.0 5.28e-01 90.7% 90.5%
3228340 4075.1.1.2 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.77 66.0 5.33e-01 94.4% 90.0%
4032029 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.76 55.0 4.49e-01 75.9% 43.2%
3947081 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.76 66.0 6.31e-01 100.0% 93.8%
4216191 3844.1.1.1 ↗ a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.76 63.0 5.05e-01 100.0% 47.6%
3622366 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.75 52.0 5.43e-01 74.1% 94.0%
4364087 3844.1.1.1 ↗ a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.75 67.0 5.22e-01 100.0% 47.0%
3705941 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.74 63.0 5.53e-01 92.6% 85.0%
4933684 2484.4.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.74 61.0 4.70e-01 88.9% 79.1%
3230359 207.1.1.66 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF3557 0.74 64.0 3.99e-01 100.0% 17.6%
3279818 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.74 51.0 3.71e-01 72.2% 46.5%
3581093 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.74 65.0 5.72e-01 100.0% 87.5%
3618370 330.1.1.24 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C 0.73 58.0 4.57e-01 85.2% 52.3%
None — 0.73 65.0 3.57e-01 100.0% 44.4%
3930399 4075.1.1.0 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain 0.73 59.0 4.82e-01 88.9% 88.9%
3300968 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 64.0 3.54e-01 100.0% 46.5%
3242315 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 52.0 5.25e-01 75.9% 81.8%
3910488 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.73 55.0 4.67e-01 79.6% 55.3%
3520119 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.72 63.0 3.77e-01 98.1% 45.6%
3929256 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.72 63.0 4.67e-01 98.1% 85.7%
3819893 5.1.4.288 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N 0.72 64.0 3.77e-01 100.0% 58.2%
3588181 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 58.0 5.26e-01 92.6% 65.3%
3702738 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.72 64.0 4.42e-01 100.0% 70.6%
3416606 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.72 62.0 4.25e-01 100.0% 30.3%
136506 4075.1.1.2 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.72 59.0 4.81e-01 90.7% 89.9%
4122018 4099.1.1.10 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.72 52.0 4.18e-01 77.8% 41.0%
3939755 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.71 51.0 3.70e-01 75.9% 83.8%
3492787 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.71 57.0 3.97e-01 94.4% 27.3%
3931156 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.71 58.0 5.30e-01 88.9% 78.6%
5018537 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.71 62.0 5.05e-01 98.1% 89.0%
3996686 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.71 57.0 4.16e-01 92.6% 32.7%
3494433 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 54.0 4.12e-01 83.3% 39.5%
1144832 2484.1.1.63 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3822 0.70 55.0 4.53e-01 87.0% 78.0%
3705072 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.70 60.0 4.79e-01 100.0% 62.6%
3199763 220.1.1.202 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.70 57.0 4.40e-01 92.6% 40.0%
3591998 220.1.1.11 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.70 62.0 4.92e-01 100.0% 77.3%
4957722 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.70 61.0 4.55e-01 100.0% 89.9%
3605378 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.70 61.0 4.86e-01 100.0% 65.5%
3627817 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.69 55.0 3.46e-01 92.6% 16.6%
5007420 2484.1.1.333 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1464 0.69 54.0 3.84e-01 87.0% 61.8%
3799100 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 60.0 3.65e-01 100.0% 17.7%
4026182 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 55.0 3.78e-01 88.9% 48.6%
5022543 2002.1.1.36 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.68 56.0 3.20e-01 88.9% 11.5%
3935387 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.67 60.0 3.90e-01 100.0% 26.7%
4933350 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 54.0 4.14e-01 88.9% 63.3%
4944430 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.67 58.0 5.15e-01 100.0% 91.3%
853 9.1.1.23 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N 0.67 58.0 4.43e-01 100.0% 84.8%
4099418 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.67 52.0 4.03e-01 87.0% 54.4%
3509387 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 58.0 4.53e-01 100.0% 66.7%
3482603 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 53.0 4.44e-01 90.7% 50.0%
3216442 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.66 55.0 3.76e-01 98.1% 28.1%
5008207 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 56.0 5.01e-01 100.0% 90.0%
5042784 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 54.0 4.21e-01 90.7% 65.8%
3741704 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.66 55.0 4.24e-01 98.1% 60.8%
3470252 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.65 56.0 4.54e-01 100.0% 86.4%
3255196 4970.1.1.28 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › SPC25 0.65 54.0 4.43e-01 92.6% 77.7%
4631877 5.1.4.219 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N 0.65 58.0 3.32e-01 100.0% 11.1%
4991691 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 56.0 3.69e-01 98.1% 24.0%
3831470 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.65 54.0 3.44e-01 96.3% 18.9%
3974671 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.64 44.0 3.86e-01 74.1% 49.4%
3520914 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.63 55.0 3.02e-01 100.0% 8.7%
3284788 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.63 44.0 3.91e-01 72.2% 50.0%
3509388 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 53.0 3.14e-01 100.0% 18.4%
3512065 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 49.0 4.61e-01 87.0% 83.1%
5060431 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.61 49.0 3.08e-01 100.0% 68.2%
4121524 304.125.1.1 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in Api92-like proteins › ferredoxin-like domain in Api92-like proteins › DUF1281_C 0.61 48.0 3.66e-01 87.0% 64.1%
3559665 213.1.1.6 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ 0.60 50.0 3.85e-01 94.4% 54.6%
4990438 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 45.0 3.64e-01 87.0% 57.6%
3508171 3392.1.1.1 ↗ a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › PAP_PilO 0.60 47.0 3.42e-01 88.9% 52.7%
3741756 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.59 49.0 4.33e-01 96.3% 91.6%
185771 3561.1.1.0 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.59 49.0 2.91e-01 100.0% 11.8%
4959571 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.59 49.0 3.30e-01 100.0% 34.7%
3828973 252.1.1.1 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.58 43.0 4.17e-01 100.0% 70.8%
3785002 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.58 49.0 4.27e-01 98.1% 90.6%
1235359 331.1.1.8 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AfAlkA-like_TBP-like 0.56 44.0 3.57e-01 90.7% 46.5%
5073960 244.2.1.7 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.54 42.0 3.60e-01 92.6% 57.1%
3435396 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.52 43.0 3.61e-01 88.9% 81.1%
5052568 244.2.1.7 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.51 39.0 3.56e-01 90.7% 63.7%