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NC_048169.1__YP_009820672.1__HOV26_gp024__00153

Bact-Vir

NC_048169.1__YP_009820672.1__HOV26_gp024__00153

Identity

Accession:
NC_048169 ↗
Kingdom:
phage

Quality

94.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Oneupvirus› Gordonia_phage_BrutonGaster

TaxID: 2530116

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-86
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.68 44.0 3.61e-01 80.0% 36.1%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 39.0 3.06e-01 87.7% 28.5%
4hscX04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.60 38.0 3.31e-01 84.6% 38.2%
3iwzA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 51.0 3.96e-01 98.5% 78.4%
3gwaA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.54 41.0 3.11e-01 81.5% 42.2%
4zy7A00 3.30.1050.40 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › 0.54 37.0 2.98e-01 70.8% 44.5%
3ip3A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 46.0 3.26e-01 96.9% 93.1%
1egaA02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.53 36.0 3.18e-01 73.8% 48.1%
2pw4A00 1.10.3300.10 Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain 0.51 41.0 2.97e-01 87.7% 71.0%
2jdaB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 32.0 2.58e-01 81.5% 28.9%
3o8sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.50 41.0 3.26e-01 90.8% 94.8%
1l5aA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 42.0 3.07e-01 95.4% 70.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3934947 192.4.1.2 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › MRP-L47 0.70 47.0 3.17e-01 70.8% 20.0%
3213226 3075.1.1.0 ↗ a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA 0.64 46.0 4.65e-01 75.4% 100.0%
3220363 3447.1.1.1 ↗ alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ERG4_ERG24 0.60 52.0 3.62e-01 95.4% 43.8%
4157339 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 35.0 2.97e-01 89.2% 31.7%
3989637 1076.1.1.1 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like 0.58 46.0 3.03e-01 87.7% 25.9%
4082091 302.1.1.0 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.57 41.0 3.56e-01 89.2% 45.2%
3711095 3075.1.1.0 ↗ a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA 0.57 44.0 4.18e-01 81.5% 82.7%
3756402 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.56 42.0 2.68e-01 86.2% 74.9%
2755218 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.56 45.0 3.30e-01 95.4% 51.5%
3622284 3075.1.1.0 ↗ a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA 0.56 48.0 2.90e-01 95.4% 76.2%
4598945 4959.1.1.0 ↗ a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit 0.55 42.0 3.26e-01 81.5% 97.9%
3875632 5054.1.1.63 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C 0.55 40.0 2.61e-01 81.5% 75.3%
None — 0.55 45.0 2.90e-01 95.4% 29.0%
3499583 109.4.1.1196 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Glyco_hydro_15 0.54 41.0 2.83e-01 83.1% 27.5%
3519143 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.54 45.0 2.98e-01 95.4% 23.0%
3959053 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 46.0 3.36e-01 95.4% 47.6%
3490148 109.4.1.339 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC-Trs85 0.54 44.0 3.37e-01 96.9% 37.5%
4390215 275.1.1.0 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.53 30.0 2.88e-01 75.4% 45.3%
3699867 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 42.0 3.08e-01 95.4% 29.7%
5001062 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 41.0 3.23e-01 86.2% 65.0%
3990622 3075.1.1.1 ↗ a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › PFU 0.52 39.0 3.80e-01 78.5% 84.3%
4668787 206.1.3.40 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD 0.52 45.0 3.07e-01 100.0% 55.0%
3255078 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 39.0 2.81e-01 87.7% 51.7%
3436318 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.51 41.0 3.77e-01 93.8% 69.9%
3210791 559.1.1.0 ↗ alpha duplicates or obligate multimers › H-NS histone-like proteins, N-terminal domain › H-NS histone-like proteins, N-terminal domain › H-NS histone-like proteins, N-terminal domain 0.51 45.0 3.93e-01 98.5% 68.0%
D2 high residues 90-145
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 54.0 5.93e-01 92.9% 93.3%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 47.0 3.05e-01 78.6% 14.6%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 53.0 5.19e-01 94.6% 70.5%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 47.0 4.76e-01 76.8% 64.9%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.72 57.0 5.38e-01 94.6% 71.6%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 44.0 4.24e-01 75.0% 54.5%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 43.0 2.77e-01 78.6% 13.7%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.68 43.0 4.20e-01 100.0% 59.0%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 49.0 4.17e-01 82.1% 48.4%
2c9oB02 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.66 54.0 4.28e-01 94.6% 45.1%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 58.0 4.94e-01 100.0% 65.2%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.65 47.0 3.41e-01 78.6% 59.9%
3hkzG00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 54.0 4.40e-01 100.0% 69.0%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.63 44.0 3.51e-01 75.0% 82.5%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 56.0 4.30e-01 100.0% 58.6%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 55.0 4.05e-01 100.0% 46.1%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 55.0 4.17e-01 100.0% 52.6%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 50.0 4.18e-01 89.3% 62.0%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 51.0 4.26e-01 94.6% 100.0%
1wydA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 55.0 4.53e-01 100.0% 64.7%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 54.0 4.59e-01 100.0% 67.7%
4a18P00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.62 45.0 4.31e-01 80.4% 66.7%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 55.0 4.70e-01 100.0% 62.6%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 54.0 4.06e-01 100.0% 47.1%
4pifA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.61 45.0 3.36e-01 78.6% 84.9%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 45.0 3.47e-01 80.4% 68.5%
6gmhH01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 49.0 3.67e-01 92.9% 35.4%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 53.0 4.34e-01 100.0% 65.7%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.59 50.0 4.06e-01 100.0% 90.8%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 51.0 3.84e-01 100.0% 48.9%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.58 42.0 3.17e-01 80.4% 84.8%
4qdiA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.58 48.0 3.28e-01 98.2% 26.6%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 44.0 3.74e-01 87.5% 61.0%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 45.0 3.82e-01 92.9% 66.3%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 40.0 2.79e-01 76.8% 44.7%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 42.0 3.80e-01 98.2% 57.5%
3butA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 3.47e-01 89.3% 89.6%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 43.0 3.47e-01 87.5% 68.6%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 41.0 3.07e-01 100.0% 31.0%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.55 46.0 3.67e-01 100.0% 53.6%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 42.0 3.63e-01 85.7% 86.8%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 45.0 2.99e-01 100.0% 42.0%
1tw0A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 46.0 3.30e-01 100.0% 33.1%
5wcmA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 38.0 2.48e-01 75.0% 83.3%
2eqsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 46.0 4.02e-01 98.2% 73.0%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.54 47.0 3.51e-01 100.0% 44.2%
2o18A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.54 44.0 2.86e-01 98.2% 40.4%
3besR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.23e-01 71.4% 79.5%
4jj0B00 2.30.42.60 Mainly Beta › Roll › Pdz3 Domain › 0.53 42.0 3.14e-01 100.0% 43.9%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 44.0 3.53e-01 100.0% 88.0%
2kjpA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 36.0 3.24e-01 71.4% 73.4%
4awyB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 37.0 2.45e-01 76.8% 81.9%
4ghnA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 43.0 3.65e-01 100.0% 78.1%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.52e-01 87.5% 88.9%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.51 41.0 3.44e-01 91.1% 65.0%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 42.0 3.46e-01 100.0% 48.2%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 38.0 3.25e-01 85.7% 55.6%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
959119 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.76 48.0 4.90e-01 76.8% 66.7%
3240661 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 54.0 3.55e-01 76.8% 73.2%
4990848 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.74 46.0 2.92e-01 78.6% 13.6%
5035671 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.73 58.0 4.66e-01 96.4% 45.7%
415 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.72 57.0 5.38e-01 94.6% 71.6%
5020098 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.72 57.0 5.28e-01 94.6% 68.6%
3386077 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.72 53.0 5.73e-01 92.9% 97.8%
1567587 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.71 52.0 4.83e-01 96.4% 62.0%
3387994 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.71 54.0 4.83e-01 94.6% 58.7%
5000498 896.1.1.1 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.70 52.0 5.09e-01 78.6% 76.7%
3965386 2.4.1.6 ↗ beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.70 56.0 4.43e-01 96.4% 42.4%
5026951 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.70 52.0 4.06e-01 96.4% 36.8%
3204169 6043.1.1.4 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 0.69 57.0 5.32e-01 100.0% 74.3%
5012547 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 62.0 5.25e-01 100.0% 63.3%
3867672 2.1.1.22 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.67 50.0 4.77e-01 92.9% 67.6%
3508531 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.67 43.0 4.53e-01 100.0% 74.0%
4144799 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.67 59.0 5.52e-01 100.0% 82.9%
5003084 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 56.0 3.82e-01 100.0% 34.5%
1245251 2.1.1.32 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TIP49 0.66 54.0 4.35e-01 94.6% 47.7%
3906493 2.1.1.142 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB 0.65 58.0 4.42e-01 100.0% 46.9%
3877687 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 48.0 3.75e-01 82.1% 36.2%
3259503 2.1.1.142 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB 0.64 57.0 4.44e-01 100.0% 50.8%
4497198 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 56.0 4.10e-01 100.0% 43.9%
4951503 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.64 55.0 4.01e-01 100.0% 34.4%
4120870 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.64 56.0 4.51e-01 100.0% 55.5%
3591633 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.64 53.0 4.21e-01 91.1% 96.4%
3671218 2.1.1.32 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TIP49 0.64 54.0 4.24e-01 96.4% 61.7%
4349584 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.64 56.0 4.33e-01 100.0% 49.6%
4928279 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 56.0 5.12e-01 100.0% 81.3%
4064637 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 56.0 4.15e-01 100.0% 51.0%
5076505 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 55.0 4.16e-01 100.0% 47.9%
1489902 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.63 51.0 4.26e-01 94.6% 100.0%
1102425 2.1.1.22 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.63 54.0 4.68e-01 100.0% 62.6%
4315057 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 55.0 4.12e-01 100.0% 55.0%
3286192 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 55.0 4.57e-01 100.0% 65.0%
3678309 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 55.0 3.93e-01 100.0% 41.2%
4934074 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 55.0 4.41e-01 100.0% 52.7%
3385864 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.62 50.0 4.91e-01 94.6% 85.0%
4439090 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.62 54.0 4.16e-01 100.0% 48.5%
4538497 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 54.0 4.44e-01 100.0% 62.9%
5043054 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 54.0 4.51e-01 100.0% 68.0%
5035745 2.1.1.123 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 0.62 52.0 4.36e-01 100.0% 65.7%
3172218 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 54.0 4.01e-01 100.0% 54.5%
3902875 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 44.0 4.27e-01 87.5% 67.7%
3806993 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.61 41.0 2.72e-01 71.4% 15.9%
3286982 330.6.1.0 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.61 46.0 3.78e-01 82.1% 94.2%
3276150 2.1.1.52 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.61 54.0 3.98e-01 100.0% 47.3%
4033869 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.61 53.0 4.36e-01 100.0% 59.0%
4668205 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 53.0 3.78e-01 100.0% 50.3%
5061446 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 51.0 3.96e-01 100.0% 77.0%
5012546 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 53.0 4.45e-01 100.0% 66.3%
3862816 391.1.2.1 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC 0.60 41.0 3.98e-01 73.2% 81.2%
3948050 4152.1.1.1 ↗ a+b two layers › Shew3726-like › Shew3726-like › Shew3726-like › DUF1488 0.59 49.0 4.53e-01 100.0% 95.0%
5035858 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 51.0 3.90e-01 100.0% 41.5%
5062107 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 40.0 2.61e-01 100.0% 13.7%
1141882 4099.1.1.3 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.59 44.0 4.03e-01 83.9% 60.5%
4450697 2007.1.12.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase 0.59 50.0 3.18e-01 98.2% 22.0%
3619859 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.59 50.0 4.00e-01 100.0% 90.8%
3241311 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 43.0 2.98e-01 78.6% 49.5%
4025310 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 51.0 3.94e-01 100.0% 50.0%
3578188 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 42.0 3.00e-01 80.4% 26.2%
3570970 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.58 44.0 3.10e-01 100.0% 23.3%
4101241 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.58 50.0 4.20e-01 100.0% 64.0%
3675857 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 40.0 2.81e-01 73.2% 30.3%
3385764 4954.1.1.0 ↗ a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit 0.58 47.0 4.31e-01 92.9% 86.7%
4080507 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.57 42.0 3.40e-01 87.5% 39.1%
4944052 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 48.0 4.11e-01 96.4% 71.6%
3832602 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.57 46.0 3.78e-01 92.9% 54.5%
3251443 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.57 45.0 3.56e-01 89.3% 48.8%
3736764 3711.1.1.0 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.57 47.0 3.33e-01 94.6% 79.4%
4188283 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.57 46.0 4.19e-01 94.6% 82.5%
3271234 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 39.0 4.19e-01 91.1% 91.1%
3788921 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.56 48.0 4.02e-01 98.2% 94.0%
3508969 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 41.0 2.81e-01 100.0% 18.6%
4249934 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.56 43.0 3.41e-01 89.3% 40.0%
3575459 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.54 39.0 2.93e-01 96.4% 29.3%
3996522 3156.1.1.1 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 0.54 40.0 3.48e-01 82.1% 50.0%
3211024 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.52 41.0 3.46e-01 91.1% 58.1%
4443928 289.1.1.1 ↗ a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.52 41.0 3.00e-01 94.6% 46.3%
4091986 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.52 37.0 3.07e-01 83.9% 39.1%
3604394 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.51 42.0 3.63e-01 100.0% 73.0%
4968103 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.51 41.0 3.12e-01 92.9% 55.9%