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NC_048173.1__YP_009821118.1__HOV30_gp074__00074
Bact-VirNC_048173.1__YP_009821118.1__HOV30_gp074__00074
Identity
- Accession:
- NC_048173 ↗
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Taxonomy
TaxID: 2530027
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-127
Domain cluster:
rep: NC_041911.1__YP_009598786.1__FDH28_gp093__00093__D20-161
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.61 | 34.0 | 4.17e-01 | 91.5% | 91.9% |
| 1i9gA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.60 | 34.0 | 4.15e-01 | 91.5% | 90.6% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.58 | 33.0 | 3.91e-01 | 92.5% | 81.9% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 26.0 | 3.25e-01 | 93.4% | 75.8% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 38.0 | 3.08e-01 | 76.4% | 96.2% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 37.0 | 2.76e-01 | 84.9% | 30.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4017093 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.62 | 40.0 | 3.56e-01 | 85.8% | 45.8% |
| 3272363 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.61 | 29.0 | 3.04e-01 | 96.2% | 46.3% |
| 3786412 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.56 | 28.0 | 3.14e-01 | 97.2% | 58.7% |
| 3223111 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.55 | 38.0 | 3.95e-01 | 100.0% | 76.0% |
| 4977574 | 241.11.1.7 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › DUF3788 | 0.53 | 43.0 | 4.08e-01 | 89.6% | 90.8% |
| 3265723 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 26.0 | 3.66e-01 | 84.9% | 100.0% |
| 5078308 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.51 | 37.0 | 3.50e-01 | 76.4% | 100.0% |
| 4942601 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 42.0 | 4.02e-01 | 94.3% | 93.1% |
| 3886356 | 11.1.5.120 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PTHB1_GAE | 0.51 | 45.0 | 4.33e-01 | 100.0% | 96.0% |
| 3713291 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 33.0 | 3.72e-01 | 86.8% | 88.7% |
D2
high
residues 153-237
D3
medium
residues 238-302
Domain cluster:
representative