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NC_048176.1__YP_009821469.1__HOV33_gp085__00085
Bact-VirNC_048176.1__YP_009821469.1__HOV33_gp085__00085
Identity
- Accession:
- NC_048176 ↗
- Kingdom:
- phage
Quality
55.7
mean pLDDT
Taxonomy
TaxID: 2562192
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-101
Domain cluster:
rep: MK448737.1__QBX17429.1__Javan351_0045__00045__D18-92
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f7cA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.61 | 52.0 | 4.10e-01 | 97.6% | 68.1% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.60 | 53.0 | 4.95e-01 | 100.0% | 83.2% |
| 2w00A05 | 1.20.58.2040 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 33.0 | 3.13e-01 | 89.2% | 45.5% |
| 1q5zA00 | 1.10.4110.10 | Mainly Alpha › Orthogonal Bundle › Invasion protein A fold › Salmonella invasion protein A, C-terminal actin-binding domain | 0.59 | 48.0 | 4.07e-01 | 91.6% | 72.4% |
| 3mzkB03 | 1.20.58.940 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 36.0 | 3.89e-01 | 78.3% | 78.6% |
| 2b6cA01 | 1.20.1660.10 | Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) | 0.55 | 40.0 | 3.53e-01 | 75.9% | 55.2% |
| 2hyjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 45.0 | 3.81e-01 | 95.2% | 61.9% |
| 1x9fA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 39.0 | 3.36e-01 | 80.7% | 95.2% |
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 42.0 | 2.99e-01 | 86.7% | 31.4% |
| 1upkA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 41.0 | 2.75e-01 | 83.1% | 28.1% |
| 1fm2B02 | 1.10.1400.10 | Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region | 0.52 | 37.0 | 2.96e-01 | 75.9% | 53.0% |
| 2db0B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 37.0 | 2.69e-01 | 75.9% | 37.5% |
| 5ez1A01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 41.0 | 3.89e-01 | 89.2% | 87.0% |
| 3bcvA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 43.0 | 3.37e-01 | 100.0% | 94.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3922866 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.59 | 51.0 | 4.08e-01 | 100.0% | 80.0% |
| 3534896 | 109.4.1.371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTP1_C1 | 0.58 | 40.0 | 2.39e-01 | 71.1% | 21.7% |
| 3746138 | 604.1.1.16 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PEX11 | 0.58 | 44.0 | 3.35e-01 | 83.1% | 94.3% |
| 3730832 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 39.0 | 3.08e-01 | 71.1% | 33.0% |
| 5076030 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.57 | 41.0 | 3.77e-01 | 74.7% | 89.5% |
| 5017855 | 3783.1.1.0 ↗ | alpha bundles › Toxin RnlA C-terminal domain › Toxin RnlA C-terminal domain › Toxin RnlA C-terminal domain | 0.57 | 48.0 | 3.68e-01 | 95.2% | 94.1% |
| 3227890 | 611.3.1.4 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Pes-10 | 0.56 | 43.0 | 4.67e-01 | 80.7% | 98.6% |
| 60072 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 33.0 | 3.37e-01 | 97.6% | 58.8% |
| 5017330 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 3.59e-01 | 79.5% | 76.8% |
| 5074202 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 39.0 | 2.99e-01 | 77.1% | 39.4% |
| 3805266 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.52 | 40.0 | 2.33e-01 | 83.1% | 11.0% |
| 5058589 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 3.27e-01 | 83.1% | 48.7% |
| 3851989 | 604.1.1.16 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PEX11 | 0.51 | 37.0 | 2.85e-01 | 77.1% | 61.5% |
| 3784918 | 109.4.1.337 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ipi1_N | 0.50 | 39.0 | 2.60e-01 | 83.1% | 23.3% |
D2
high
residues 108-205