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NC_048176.1__YP_009821513.1__HOV33_gp208__00129

Bact-Vir

NC_048176.1__YP_009821513.1__HOV33_gp208__00129

Identity

Accession:
NC_048176 ↗
Kingdom:
phage

Quality

63.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 78-148
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4o4oA00 2.40.128.590 Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain 0.54 48.0 3.51e-01 100.0% 58.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4436049 1190.1.1.1 a+b two layers › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › CsgF 0.60 31.0 2.77e-01 93.0% 34.0%
3665879 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.54 38.0 3.04e-01 84.5% 34.2%
4635290 4967.1.1.25 alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N 0.52 35.0 2.24e-01 71.8% 47.2%
4391867 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.52 36.0 2.27e-01 74.6% 30.6%
3282895 912.1.1.0 few secondary structure elements › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain 0.51 35.0 2.61e-01 70.4% 81.5%
4635289 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.50 34.0 2.16e-01 70.4% 50.5%